Logo Logo
Eine Ebene nach oben
Exportieren als [RSS feed] RSS 1.0 [RSS2 feed] RSS 2.0
Gruppiert nach: Dokumententyp | Veröffentlichungsdatum
Anzahl der Publikationen: 23

Zeitschriftenartikel

Oberbeckmann, Elisa; Niebauer, Vanessa; Watanabe, Shinya; Farnung, Lucas; Moldt, Manuela; Schmid, Andrea; Cramer, Patrick; Peterson, Craig L.; Eustermann, Sebastian; Hopfner, Karl-Peter und Korber, Philipp (2021): Ruler elements in chromatin remodelers set nucleosome array spacing and phasing. In: Nature Communications, Bd. 12, Nr. 1, 3232

Gressel, Saskia; Schwalb, Björn; Decker, Tim Michael; Qin, Weihua; Leonhardt, Heinrich; Eick, Dirk und Cramer, Patrick (2017): CDK9-dependent RNA polymerase II pausing controls transcription initiation. In: Elife, Bd. 6, e29736 [PDF, 5MB]

Michel, Margaux; Demel, Carina; Zacher, Benedikt; Schwalb, Björn; Krebs, Stefan; Blum, Helmut; Gagneur, Julien und Cramer, Patrick (2017): TT-seq captures enhancer landscapes immediately after T-cell stimulation. In: Molecular Systems Biology, Bd. 13, Nr. 3, 920

Baejen, Carlo; Andreani, Jessica; Torkler, Phillipp; Battaglia, Sofia; Schwalb, Bjoern; Lidschreiber, Michael; Maier, Kerstin C.; Boltendahl, Andrea; Rus, Petra; Esslinger, Stephanie; Söding, Johannes und Cramer, Patrick (2017): Genome-wide Analysis of RNA Polymerase II Termination at Protein-Coding Genes. In: Molecular Cell, Bd. 66, Nr. 1: S. 38-49

Zacher, Benedikt; Michel, Margaux; Schwalb, Björn; Cramer, Patrick; Tresch, Achim und Gagneur, Julien (2017): Accurate Promoter and Enhancer Identification in 127 ENCODE and Roadmap Epigenomics Cell Types and Tissues by GenoSTAN.
In: PLOS One 12(1), e0169249 [PDF, 6MB]

Eser, Philipp; Wachutka, Leonhard; Maier, Kerstin C.; Demel, Carina; Boroni, Mariana; Iyer, Srignanakshi; Cramer, Patrick und Gagneur, Julien (2016): Determinants of RNA metabolism in the Schizosaccharomyces pombe genome. In: Molecular Systems Biology, Bd. 12, Nr. 2, 857 [PDF, 1MB]

Vos, Seychelle M.; Pöllmann, David; Caizzi, Livia; Hofmann, Katharina B.; Rombaut, Pascaline; Zimniak, Tomasz; Herzog, Franz ORCID logoORCID: https://orcid.org/0000-0001-8270-1449 und Cramer, Patrick (2016): Architecture and RNA binding of the human negative elongation factor. In: eLife, Bd. 5, e14981 [PDF, 11MB]

Bernecky, Carrie; Herzog, Franz; Baumeister, Wolfgang; Plitzko, Jürgen M. und Cramer, Patrick (2016): Structure of transcribing mammalian RNA polymerase II. In: Nature, Bd. 529, Nr. 7587: S. 551-554

Niesser, Jürgen; Wagner, Felix R.; Kostrewa, Dirk; Mühlbacher, Wolfgang und Cramer, Patrick (2016): Structure of GPN-Loop GTPase Npa3 and Implications for RNA Polymerase II Assembly. In: Molecular and Cellular Biology, Bd. 36, Nr. 5: S. 820-831

Eser, Philipp; Wachutka, Leonhard; Maier, Kerstin C.; Demel, Carina; Boroni, Mariana; Iyer, Srignanakshi; Cramer, Patrick und Gagneur, Julien (2016): Determinants of RNA metabolism in the Schizosaccharomyces pombe genome. In: Molecular Systems Biology, Bd. 12, Nr. 2, 857

Schwalb, Björn; Michel, Margaux; Zacher, Benedikt; Frühauf, Katja; Demel, Carina; Tresch, Achim; Gagneur, Julien und Cramer, Patrick (2016): TT-seq maps the human transient transcriptome. In: Science, Bd. 352, Nr. 6290: S. 1225-1228

Schüller, Roland; Forné, Ignasi; Straub, Tobias; Schreieck, Amelie; Texier, Yves; Shah, Nilay; Decker, Tim-Michael; Cramer, Patrick; Imhof, Axel und Eick, Dirk (2016): Heptad-Specific Phosphorylation of RNA Polymerase II CTD. In: Molecular Cell, Bd. 61, Nr. 2: S. 305-314

Vos, Seychelle M.; Pöllmann, David; Caizzi, Livia; Hofmann, Katharina B.; Rombaut, Pascaline; Zimniak, Tomasz; Herzog, Franz und Cramer, Patrick (2016): Architecture and RNA binding of the human negative elongation factor. In: eLife, Bd. 5, e14981 [PDF, 6MB]

Eser, Philipp; Demel, Carina; Maier, Kerstin C.; Schwalb, Björn; Pirkl, Nicole; Martin, Dietmar E.; Cramer, Patrick und Tresch, Achim (2014): Periodic mRNA synthesis and degradation co-operate during cell cycle gene expression. In: Molecular Systems Biology, Bd. 10, Nr. 1

Hirschmann, Wolf D.; Westendorf, Heidrun; Mayer, Andreas; Cannarozzi, Gina; Cramer, Patrick und Jansen, Ralf-Peter (2014): Scp160p is required for translational efficiency of codon-optimized mRNAs in yeast. In: Nucleic Acids Research, Bd. 42, Nr. 6: S. 4043-4055 [PDF, 2MB]

Morozov, Yaroslav I.; Agaronyan, Karen; Cheung, Alan C. M.; Anikin, Michael; Cramer, Patrick und Temiakov, Dmitry (2014): A novel intermediate in transcription initiation by human mitochondrial RNA polymerase. In: Nucleic Acids Research, Bd. 42, Nr. 6: S. 3884-3893 [PDF, 2MB]

Sydow, Jasmin F.; Lipsmeier, Florian; Larraillet, Vincent; Hilger, Maximiliane; Mautz, Björn; Mølhøj,, Michael; Kuentzer, Jan; Klostermann, Stefan; Schoch, Jürgen; Voelger, Hans R.; Regula, Jörg T.; Cramer, Patrick; Papadimitriou, Apollon und Kettenberger, Hubert (2014): Structure-Based Prediction of Asparagine and Aspartate Degradation Sites in Antibody Variable Regions.
In: PLOS ONE 9(6), e100736 [PDF, 1MB]

Mühlbacher, Wolfgang; Sainsbury, Sarah; Hemann, Matthias; Hantsche, Merle; Neyer, Simon; Herzog, Franz und Cramer, Patrick (2014): Conserved architecture of the core RNA polymerase II initiation complex. In: Nature Communications, Bd. 5, 4310 [PDF, 854kB]

Zacher, Benedikt; Lidschreiber, Michael; Cramer, Patrick; Gagneur, Julien und Tresch, Achim (2014): Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle. In: Molecular Systems Biology, Bd. 10, Nr. 12, 768 [PDF, 2MB]

Niederberger, Theresa; Etzold, Stefanie; Lidschreiber, Michael; Maier, Kerstin C.; Martin, Dietmar E.; Fröhlich, Holger; Cramer, Patrick und Tresch, Achim (2012): MC EMiNEM maps the interaction landscape of the Mediator.
In: PLOS Computational Biology 8(6), e1002568 [PDF, 775kB]

Seizl, Martin; Hartmann, Holger; Hoeg, Frederike; Kurth, Fabian; Martin, Dietmar E.; Söding, Johannes und Cramer, Patrick (September 2011): A Conserved GA Element in TATA-Less RNA Polymerase II Promoters.
In: PLOS ONE 6(11), e27595 [PDF, 988kB]

Müller, Marisa; Heym, Roland Gerhard; Mayer, Andreas; Kramer, Katharina; Schmid, Maria; Cramer, Patrick; Urlaub, Henning; Jansen, Ralf-Peter und Niessing, Dierk (April 2011): A cytoplasmic complex mediates specific mRNA recognition and localization in yeast.
In: PLOS Biology 9(4), e1000611 [PDF, 3MB]

Cramer, Patrick (2010): Towards molecular systems biology of gene transcription and regulation. In: Biological Chemistry, Bd. 391, Nr. 7: S. 731-735 [PDF, 292kB]

Diese Liste wurde am Sat Mar 16 21:11:28 2024 CET erstellt.