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Anzahl der Publikationen: 7
Zeitschriftenartikel
Luo, Jie; Molbay, Muge; Chen, Ying; Horvath, Izabela 
ORCID: https://orcid.org/0000-0002-1702-2869; Kadletz, Karoline; Kick, Benjamin; Zhao, Shan; Al-Maskari, Rami; Singh, Inderjeet; Ali, Mayar; Bhatia, Harsharan Singh; Minde, David-Paul; Negwer, Moritz; Hoeher, Luciano; Calandra, Gian Marco; Groschup, Bernhard; Su, Jinpeng; Kimna, Ceren ORCID: https://orcid.org/0000-0003-2283-4295; Rong, Zhouyi ORCID: https://orcid.org/0000-0003-4849-1278; Galensowske, Nikolas; Todorov, Mihail Ivilinov ORCID: https://orcid.org/0000-0002-8627-1260; Jeridi, Denise; Ohn, Tzu-Lun; Roth, Stefan ORCID: https://orcid.org/0000-0001-6823-2981; Simats, Alba; Singh, Vikramjeet ORCID: https://orcid.org/0000-0002-7361-8317; Khalin, Igor ORCID: https://orcid.org/0000-0003-1041-5747; Pan, Chenchen; Arús, Bernardo A. ORCID: https://orcid.org/0000-0001-6132-7793; Bruns, Oliver T.; Zeidler, Reinhard ORCID: https://orcid.org/0000-0002-3357-4954; Liesz, Arthur ORCID: https://orcid.org/0000-0002-9069-2594; Protzer, Ulrike ORCID: https://orcid.org/0000-0002-9421-1911; Plesnila, Nikolaus ORCID: https://orcid.org/0000-0001-8832-228X; Ussar, Siegfried ORCID: https://orcid.org/0000-0001-7575-0920; Hellal, Farida; Paetzold, Johannes; Elsner, Markus ORCID: https://orcid.org/0000-0001-7227-5212; Dietz, Hendrik ORCID: https://orcid.org/0000-0003-1270-3662 und Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100
(2025):
Nanocarrier imaging at single-cell resolution across entire mouse bodies with deep learning.
In: Nature Biotechnology [Forthcoming]
ORCID: https://orcid.org/0000-0002-1702-2869; Kadletz, Karoline; Kick, Benjamin; Zhao, Shan; Al-Maskari, Rami; Singh, Inderjeet; Ali, Mayar; Bhatia, Harsharan Singh; Minde, David-Paul; Negwer, Moritz; Hoeher, Luciano; Calandra, Gian Marco; Groschup, Bernhard; Su, Jinpeng; Kimna, Ceren ORCID: https://orcid.org/0000-0003-2283-4295; Rong, Zhouyi ORCID: https://orcid.org/0000-0003-4849-1278; Galensowske, Nikolas; Todorov, Mihail Ivilinov ORCID: https://orcid.org/0000-0002-8627-1260; Jeridi, Denise; Ohn, Tzu-Lun; Roth, Stefan ORCID: https://orcid.org/0000-0001-6823-2981; Simats, Alba; Singh, Vikramjeet ORCID: https://orcid.org/0000-0002-7361-8317; Khalin, Igor ORCID: https://orcid.org/0000-0003-1041-5747; Pan, Chenchen; Arús, Bernardo A. ORCID: https://orcid.org/0000-0001-6132-7793; Bruns, Oliver T.; Zeidler, Reinhard ORCID: https://orcid.org/0000-0002-3357-4954; Liesz, Arthur ORCID: https://orcid.org/0000-0002-9069-2594; Protzer, Ulrike ORCID: https://orcid.org/0000-0002-9421-1911; Plesnila, Nikolaus ORCID: https://orcid.org/0000-0001-8832-228X; Ussar, Siegfried ORCID: https://orcid.org/0000-0001-7575-0920; Hellal, Farida; Paetzold, Johannes; Elsner, Markus ORCID: https://orcid.org/0000-0001-7227-5212; Dietz, Hendrik ORCID: https://orcid.org/0000-0003-1270-3662 und Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100
(2025):
Nanocarrier imaging at single-cell resolution across entire mouse bodies with deep learning.
In: Nature Biotechnology [Forthcoming]
Mai, Hongcheng; Luo, Jie; Hoeher, Luciano; Al-Maskari, Rami; Horvath, Izabela; Chen, Ying; Kofler, Florian; Piraud, Marie; Paetzold, Johannes C. C.; Modamio, Jennifer; Todorov, Mihail; Elsner, Markus; Hellal, Farida und Ertuerk, Ali
(2024):
Whole-body cellular mapping in mouse using standard IgG antibodies.
In: Nature Biotechnology, Bd. 42, Nr. 4
[PDF, 14MB]
Kaltenecker, Doris; Al-Maskari, Rami; Negwer, Moritz; Hoeher, Luciano; Kofler, Florian; Zhao, Shan; Todorov, Mihail ORCID: https://orcid.org/0000-0002-8627-1260; Rong, Zhouyi; Paetzold, Johannes Christian; Wiestler, Benedikt ORCID: https://orcid.org/0000-0002-2963-7772; Piraud, Marie ORCID: https://orcid.org/0000-0002-4917-2458; Rueckert, Daniel ORCID: https://orcid.org/0000-0002-5683-5889; Geppert, Julia; Morigny, Pauline; Rohm, Maria ORCID: https://orcid.org/0000-0003-3926-1534; Menze, Bjoern H.; Herzig, Stephan ORCID: https://orcid.org/0000-0003-3950-3652; Berriel Diaz, Mauricio ORCID: https://orcid.org/0000-0003-4670-919X und Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100
(2024):
Virtual reality-empowered deep-learning analysis of brain cells.
In: Nature Methods [Forthcoming]
[PDF, 7MB]
ORCID: https://orcid.org/0000-0002-8627-1260; Rong, Zhouyi; Paetzold, Johannes Christian; Wiestler, Benedikt ORCID: https://orcid.org/0000-0002-2963-7772; Piraud, Marie ORCID: https://orcid.org/0000-0002-4917-2458; Rueckert, Daniel ORCID: https://orcid.org/0000-0002-5683-5889; Geppert, Julia; Morigny, Pauline; Rohm, Maria ORCID: https://orcid.org/0000-0003-3926-1534; Menze, Bjoern H.; Herzig, Stephan ORCID: https://orcid.org/0000-0003-3950-3652; Berriel Diaz, Mauricio ORCID: https://orcid.org/0000-0003-4670-919X und Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100
(2024):
Virtual reality-empowered deep-learning analysis of brain cells.
In: Nature Methods [Forthcoming]
[PDF, 7MB]
Bhatia, Harsharan Singh; Brunner, Andreas-David; Oeztuerk, Furkan; Kapoor, Saketh; Rong, Zhouyi; Mai, Hongcheng; Thielert, Marvin; Ali, Mayar; Al-Maskari, Rami; Paetzold, Johannes Christian; Kofler, Florian; Todorov, Mihail Ivilinov; Molbay, Muge; Kolabas, Zeynep Ilgin; Negwer, Moritz; Hoeher, Luciano; Steinke, Hanno; Dima, Alina; Gupta, Basavdatta; Kaltenecker, Doris; Caliskan, Ozum Sehnaz; Brandt, Daniel; Krahmer, Natalie; Mueller, Stephan; Lichtenthaler, Stefan Frieder; Hellal, Farida; Bechmann, Ingo; Menze, Bjoern; Theis, Fabian; Mann, Matthias und Ertuerk, Ali
(2022):
Spatial proteomics in three-dimensional intact specimens.
In: Cell, Bd. 185, Nr. 26: S. 5040-5058
[PDF, 488kB]
Konferenzbeitrag
Kofler, Florian; Shit, Suprosanna; Ezhov, Ivan; Fidon, Lucas; Horvath, Izabela; Al-Maskari, Rami; Li, Hongwei Bran; Bhatia, Harsharan Singh; Loehr, Timo; Piraud, Marie; Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100; Kirschke, Jan; Peeken, Jan C.; Vercauteren, Tom; Zimmer, Claus; Wiestler, Benedikt und Menze, Bjoern
(2023):
blob loss: Instance Imbalance Aware Loss Functions for Semantic Segmentation.
28th International Conference on Information Processing in Medical Imaging (IPMI), San Carlos De Bariloche, Argentina, 18. - 23. Juni 2023.
Frangi, Alejandro; Bruijne, Marleen de; Wassermann, Demian und Navab, Nassir (Hrsg.):
In: Information Processing in Medical Imaging, Lecture Notes in Computer Science
Bd. 13939
Cham: Springer. S. 755-767
ORCID: https://orcid.org/0000-0001-5163-5100; Kirschke, Jan; Peeken, Jan C.; Vercauteren, Tom; Zimmer, Claus; Wiestler, Benedikt und Menze, Bjoern
(2023):
blob loss: Instance Imbalance Aware Loss Functions for Semantic Segmentation.
28th International Conference on Information Processing in Medical Imaging (IPMI), San Carlos De Bariloche, Argentina, 18. - 23. Juni 2023.
Frangi, Alejandro; Bruijne, Marleen de; Wassermann, Demian und Navab, Nassir (Hrsg.):
In: Information Processing in Medical Imaging, Lecture Notes in Computer Science
Bd. 13939
Cham: Springer. S. 755-767
Kofler, Florian; Wahle, Johannes; Ezhov, Ivan; Wagner, Sophia J.; Al-Maskari, Rami; Gryska, Emilia; Todorov, Mihail ORCID: https://orcid.org/0000-0002-8627-1260; Bukas, Christina; Meissen, Felix; Peng, Tingying; Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100; Rueckert, Daniel; Heckemann, Rolf; Kirschke, Jan; Zimmer, Claus; Wiestler, Benedikt; Menze, Bjoern und Piraud, Marie
(2023):
Approaching Peak Ground Truth.
20th IEEE International Symposium on Biomedical Imaging (ISBI), Cartagena, Colombia, 11. - 16. September 2022.
Institute of Electrical and Electronics Engineers (Hrsg.),
In: 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI),
Piscataway: IEEE.
ORCID: https://orcid.org/0000-0002-8627-1260; Bukas, Christina; Meissen, Felix; Peng, Tingying; Ertürk, Ali ORCID: https://orcid.org/0000-0001-5163-5100; Rueckert, Daniel; Heckemann, Rolf; Kirschke, Jan; Zimmer, Claus; Wiestler, Benedikt; Menze, Bjoern und Piraud, Marie
(2023):
Approaching Peak Ground Truth.
20th IEEE International Symposium on Biomedical Imaging (ISBI), Cartagena, Colombia, 11. - 16. September 2022.
Institute of Electrical and Electronics Engineers (Hrsg.),
In: 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI),
Piscataway: IEEE.
Horvath, Izabela; Paetzold, Johannes; Schoppe, Oliver; Al-Maskari, Rami; Ezhov, Ivan; Shit, Suprosanna; Li, Hongwei; Ertürk, Ali und Menze, Bjoern
(2022):
METGAN: Generative Tumour Inpainting and Modality Synthesis in Light Sheet Microscopy.
2022 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV), Waikoloa, Hawaii; Online, 2022.01.04-08.
Mortensen, Eric (Hrsg.):
In: 2022 IEEE Winter Conference on Applications of Computer Vision : 4-8 January 2022, Waikoloa, Hawaii : proceedings,
Piscataway, NJ: IEEE. S. 3230-3240