|
Eine Ebene nach oben |
Gruppiert nach:
Dokumententyp
| Veröffentlichungsdatum
Springe zu: Zeitschriftenartikel
Anzahl der Publikationen: 17
Zeitschriftenartikel
Janjic, Aleksandar; Wange, Lucas E.; Bagnoli, Johannes W.; Geuder, Johanna; Nguyen, Phong; Richter, Daniel; Vieth, Beate; Vick, Binje; Jeremias, Irmela; Ziegenhain, Christoph; Hellmann, Ines und Enard, Wolfgang
(31. März 2022):
Prime-seq, efficient and powerful bulk RNA sequencing.
In: Genome Biology, Bd. 23
[PDF, 2MB]
Zeller, Christina 
ORCID: https://orcid.org/0000-0003-1834-965X; Richter, Daniel ORCID: https://orcid.org/0000-0003-1302-9083; Jurinovic, Vindi; Valtierra-Gutiérrez, Ilse A. ORCID: https://orcid.org/0000-0003-4128-5914; Jayavelu, Ashok Kumar; Mann, Matthias; Bagnoli, Johannes W. ORCID: https://orcid.org/0000-0003-0393-6157; Hellmann, Ines ORCID: https://orcid.org/0000-0003-0588-1313; Herold, Tobias ORCID: https://orcid.org/0000-0002-9615-9432; Enard, Wolfgang ORCID: https://orcid.org/0000-0002-4056-0550; Vick, Binje ORCID: https://orcid.org/0000-0003-1956-2778 und Jeremias, Irmela ORCID: https://orcid.org/0000-0003-1773-7677
(2022):
Adverse stem cell clones within a single patient’s tumor predict clinical outcome in AML patients.
In: Journal of Hematology & Oncology, Bd. 15, 25
[PDF, 1MB]
ORCID: https://orcid.org/0000-0003-1834-965X; Richter, Daniel ORCID: https://orcid.org/0000-0003-1302-9083; Jurinovic, Vindi; Valtierra-Gutiérrez, Ilse A. ORCID: https://orcid.org/0000-0003-4128-5914; Jayavelu, Ashok Kumar; Mann, Matthias; Bagnoli, Johannes W. ORCID: https://orcid.org/0000-0003-0393-6157; Hellmann, Ines ORCID: https://orcid.org/0000-0003-0588-1313; Herold, Tobias ORCID: https://orcid.org/0000-0002-9615-9432; Enard, Wolfgang ORCID: https://orcid.org/0000-0002-4056-0550; Vick, Binje ORCID: https://orcid.org/0000-0003-1956-2778 und Jeremias, Irmela ORCID: https://orcid.org/0000-0003-1773-7677
(2022):
Adverse stem cell clones within a single patient’s tumor predict clinical outcome in AML patients.
In: Journal of Hematology & Oncology, Bd. 15, 25
[PDF, 1MB]
Takahashi, Kazutoshi ORCID: https://orcid.org/0000-0002-5329-8395; Nakamura, Michiko; Okubo, Chikako ORCID: https://orcid.org/0000-0001-5562-410X; Kliesmete, Zane ORCID: https://orcid.org/0000-0001-7017-6616; Ohnuki, Mari; Narita, Megumi; Watanabe, Akira ORCID: https://orcid.org/0000-0002-4381-4229; Ueda, Mai ORCID: https://orcid.org/0000-0002-4639-4100; Takashima, Yasuhiro ORCID: https://orcid.org/0000-0003-0126-7260; Hellmann, Ines und Yamanaka, Shinya
(2021):
The pluripotent stem cell-specific transcript ESRG is dispensable for human pluripotency.
In: PLOS Genetics 17(5), e1009587 [PDF, 3MB]
ORCID: https://orcid.org/0000-0002-5329-8395; Nakamura, Michiko; Okubo, Chikako ORCID: https://orcid.org/0000-0001-5562-410X; Kliesmete, Zane ORCID: https://orcid.org/0000-0001-7017-6616; Ohnuki, Mari; Narita, Megumi; Watanabe, Akira ORCID: https://orcid.org/0000-0002-4381-4229; Ueda, Mai ORCID: https://orcid.org/0000-0002-4639-4100; Takashima, Yasuhiro ORCID: https://orcid.org/0000-0003-0126-7260; Hellmann, Ines und Yamanaka, Shinya
(2021):
The pluripotent stem cell-specific transcript ESRG is dispensable for human pluripotency.
In: PLOS Genetics 17(5), e1009587 [PDF, 3MB]
Kaelin, Roland E.; Cai, Linzhi; Li, Yuping; Zhao, Dongxu; Zhang, Huabin; Cheng, Jiying; Zhang, Wenlong; Wu, Yingxi; Eisenhut, Katharina; Janssen, Philipp; Schmitt, Lukas; Enard, Wolfgang; Michels, Friederike; Flueh, Charlotte; Hou, Mengzhuo; Kirchleitner, Sabrina V.; Siller, Sebastian; Schiemann, Matthias; Andrae, Immanuel; Montanez, Eloi; Giachino, Claudio; Taylor, Verdon; Synowitz, Michael; Tonn, Jorg-Christian; Baumgarten, Louisa von; Schulz, Christian; Hellmann, Ines und Glass, Rainer
(2021):
TAMEP are brain tumor parenchymal cells controlling neoplastic angiogenesis and progression.
In: Cell Systems, Bd. 12, Nr. 3: S. 248-262
Vieth, Beate; Parekh, Swati; Ziegenhain, Christoph; Enard, Wolfgang und Hellmann, Ines
(2019):
A systematic evaluation of single cell RNA-seq analysis pipelines.
In: Nature Communications, Bd. 10, 4667
[PDF, 3MB]
Greif, Philipp A.; Hartmann, Luise; Vosberg, Sebastian; Stief, Sophie M.; Mattes, Raphael; Hellmann, Ines; Metzeler, Klaus H.; Herold, Tobias; Bamopoulos, Stefanos A.; Kerbs, Paul; Jurinovic, Vindi; Schumacher, Daniela; Pastore, Friederike; Bräundl, Kathrin; Zellmeier, Evelyn; Ksienzyk, Bianka; Konstandin, Nikola P.; Schneider, Stephanie; Graf, Alexander; Krebs, Stefan; Blum, Helmut; Neumann, Martin; Baldus, Claudia D.; Bohlander, Stefan K.; Wolf, Stephan; Görlich, Dennis; Berdel, Wolfgang E.; Wörmann, Bernhard J.; Hiddemann, Wolfgang und Spiekermann, Karsten
(2018):
Evolution of Cytogenetically Normal Acute Myeloid Leukemia During Therapy and Relapse: An Exome Sequencing Study of 50 Patients.
In: Clinical Cancer Research, Bd. 24, Nr. 7: S. 1716-1726
Parekh, Swati; Ziegenhain, Christoph; Vieth, Beate; Enard, Wolfgang und Hellmann, Ines
(2018):
zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs.
In: Gigascience, Bd. 7, Nr. 6
[PDF, 2MB]
Bagnoli, Johannes W.; Ziegenhain, Christoph; Janjic, Aleksandar; Wange, Lucas E.; Vieth, Beate; Parekh, Swati; Geuder, Johanna; Hellmann, Ines und Enard, Wolfgang
(2018):
Sensitive and powerful single-cell RNA sequencing using mcSCRB-seq.
In: Nature Communications, Bd. 9, 2937
[PDF, 1MB]
Ziegenhain, Christoph; Vieth, Beate; Parekh, Swati; Hellmann, Ines und Enard, Wolfgang
(2018):
Quantitative single-cell transcriptomics.
In: Briefings in Functional Genomics, Bd. 17, Nr. 4: S. 220-232
Zhang, Peng; Ludwig, Anne K.; Hastert, Florian D.; Rausch, Cathia; Lehmkuhl, Anne; Hellmann, Ines; Smets, Martha; Leonhardt, Heinrich und Cardoso, M. Cristina
(2017):
L1 retrotransposition is activated by Ten-eleven-translocation protein 1 and repressed by methyl-CpG binding proteins.
In: Nucleus, Bd. 8, Nr. 5: S. 548-562
Ziegenhain, Christoph; Vieth, Beate; Parekh, Swati; Reinius, Björn; Guillaumet-Adkins, Amy; Smets, Martha; Leonhardt, Heinrich; Heyn, Holger; Hellmann, Ines und Enard, Wolfgang
(2017):
Comparative Analysis of Single-Cell RNA Sequencing Methods.
In: Molecular Cell, Bd. 65, Nr. 4:
631-+
Cremer, Marion; Schmid, Volker J. ORCID: https://orcid.org/0000-0003-2195-8130; Kraus, Felix; Markaki, Yolanda; Hellmann, Ines; Maiser, Andreas; Leonhardt, Heinrich; John, Sam; Stamatoyannopoulos, John und Cremer, Thomas
(2017):
Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters.
In: Epigenetics & Chromatin
:10:39
[PDF, 5MB]
ORCID: https://orcid.org/0000-0003-2195-8130; Kraus, Felix; Markaki, Yolanda; Hellmann, Ines; Maiser, Andreas; Leonhardt, Heinrich; John, Sam; Stamatoyannopoulos, John und Cremer, Thomas
(2017):
Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters.
In: Epigenetics & Chromatin
:10:39
[PDF, 5MB]
Vieth, Beate; Ziegenhain, Christoph; Parekh, Swati; Enard, Wolfgang und Hellmann, Ines
(2017):
powsimR: power analysis for bulk and single cell RNA-seq experiments.
In: Bioinformatics, Bd. 33, Nr. 21: S. 3486-3488
Ludwig, Anne K.; Zhang, Peng; Hastert, Florian D.; Meyer, Stephanie; Rausch, Cathia; Herce, Henry D.; Müller, Udo; Lehmkuhl, Anne; Hellmann, Ines; Trummer, Carina; Storm, Christian; Leonhardt, Heinrich und Cardoso, M. Cristina
(2017):
Binding of MBD proteins to DNA blocks Tet1 function thereby modulating transcriptional noise.
In: Nucleic Acids Research, Bd. 45, Nr. 5: S. 2438-2457
Parekh, Swati; Ziegenhain, Christoph; Vieth, Beate; Enard, Wolfgang und Hellmann, Ines
(2016):
The impact of amplification on differential expression analyses by RNA-seq.
In: Scientific Reports, Bd. 6, 25533
[PDF, 1MB]
DeGiorgio, Michael; Huber, Christian D.; Hubisz, Melissa J.; Hellmann, Ines und Nielsen, Rasmus
(2016):
SWEEPFINDER2: increased sensitivity, robustness and flexibility.
In: Bioinformatics, Bd. 32, Nr. 12: S. 1895-1897
Huber, Christian D.; DeGiorgio, Michael; Hellmann, Ines und Nielsen, Rasmus
(2016):
Detecting recent selective sweeps while controlling for mutation rate and background selection.
In: Molecular Ecology, Bd. 25, Nr. 1: S. 142-156