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Eine Ebene höher- EU-Projekte (714)
- Horizon 2020 (624)
- ERC Grants (482)
- ERC Starting Grant (187)
- ERC Grant 638536: SM-IMPORT - Substrate import at work: single-molecule studies of ABC transporters (22)
- ERC Starting Grant (187)
- ERC Grants (482)
- Horizon 2020 (624)
Anzahl der Publikationen auf dieser Ebene: 22
Department Biologie I
Boer, Marijn de; Gouridis, Giorgos; Muthahari, Yusran Abdillah und Cordes, Thorben 
ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
Single-Molecule Observation of Ligand Binding and Conformational Changes in FeuA.
In: Biophysical journal, Bd. 117, Nr. 9: S. 1642-1654
[PDF, 1MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
Single-Molecule Observation of Ligand Binding and Conformational Changes in FeuA.
In: Biophysical journal, Bd. 117, Nr. 9: S. 1642-1654
[PDF, 1MB]
Boer, Marijn de; Gouridis, Giorgos; Vietrov, Ruslan; Begg, Stephanie L.; Schuurman-Wolters, Gea K.; Husada, Florence; Eleftheriadis, Nikolaos; Poolman, Bert; McDevitt, Christopher A. und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
Conformational and dynamic plasticity in substrate-binding proteins underlies selective transport in ABC importers.
In: eLife, Bd. 8, e44652
[PDF, 2MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
Conformational and dynamic plasticity in substrate-binding proteins underlies selective transport in ABC importers.
In: eLife, Bd. 8, e44652
[PDF, 2MB]
Gouridis, Giorgos; Hetzert, Bianca; Kiosze-Becker, Kristin; Boer, Marijnde; Heinemann, Holger; Nürenberg-Goloub, Elina; Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499 und Tampé, Robert
(2019):
ABCE1 Controls Ribosome Recycling by an Asymmetric Dynamic Conformational Equilibrium.
In: Cell reports, Bd. 28, Nr. 3, e6: S. 723-734
[PDF, 3MB]
ORCID: https://orcid.org/0000-0002-8598-5499 und Tampé, Robert
(2019):
ABCE1 Controls Ribosome Recycling by an Asymmetric Dynamic Conformational Equilibrium.
In: Cell reports, Bd. 28, Nr. 3, e6: S. 723-734
[PDF, 3MB]
Henrikus, Sarah S.; Tassis, Konstantinos; Zhang, Lei; Velde, Jasper H. M. van der; Gebhardt, Christian; Herrmann, Andreas; Jung, Gregor ORCID: https://orcid.org/0000-0002-2438-7436 und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2. Dezember 2021):
Characterization of fluorescent proteins with intramolecular photostabilization.
In: ChemBioChem, Bd. 22, Nr. 23: S. 3234
ORCID: https://orcid.org/0000-0002-2438-7436 und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2. Dezember 2021):
Characterization of fluorescent proteins with intramolecular photostabilization.
In: ChemBioChem, Bd. 22, Nr. 23: S. 3234
Henrikus, Sarah S.; Tassis, Konstantinos; Zhang, Lei; Velde, Jasper H. M. van der; Gebhardt, Christian; Herrmann, Andreas; Jung, Gregor und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2020):
Characterization of fluorescent proteins with intramolecular photostabilization.
bioRxiv
[PDF, 3MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2020):
Characterization of fluorescent proteins with intramolecular photostabilization.
bioRxiv
[PDF, 3MB]
Husada, Florence; Bountra, Kiran; Tassis, Konstantinos; Bör, Marijn de; Romano, Maria; Rebuffat, Sylvie; Beis, Konstantinos und Cordes, Thorben
(2018):
Conformational dynamics of the ABC transporter McjD seen by single-molecule FRET.
In: EMBO Journal, Bd. 37, Nr. 21, e100056
[PDF, 1MB]
Isselstein, Michael; Zhang, Lei; Glembockyte, Viktorija; Brix, Oliver; Cosa, Gonzalo; Tinnefeld, Philip und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2020):
Self-Healing Dyes - Keeping the Promise?
In: Journal of physical chemistry letters, Bd. 11, Nr. 11: S. 4462-4480
[PDF, 12MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2020):
Self-Healing Dyes - Keeping the Promise?
In: Journal of physical chemistry letters, Bd. 11, Nr. 11: S. 4462-4480
[PDF, 12MB]
Kolbeck, Pauline J.; Vanderlinden, Willem; Gemmecker, Gerd; Gebhardt, Christian; Lehmann, Martin; Lak, Aidin; Nicolaus, Thomas; Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499 und Lipfert, Jan
(2021):
Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold.
In: Nucleic acids research, Bd. 49, Nr. 9: S. 5143-5158
[PDF, 2MB]
ORCID: https://orcid.org/0000-0002-8598-5499 und Lipfert, Jan
(2021):
Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold.
In: Nucleic acids research, Bd. 49, Nr. 9: S. 5143-5158
[PDF, 2MB]
Lerner, Eitan; Barth, Anders; Hendrix, Jelle; Ambrose, Benjamin; Birkedal, Victoria; Blanchard, Scott C.; Börner, Richard; Sung Chung, Hoi; Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499; Craggs, Timothy D.; Deniz, Ashok A.; Diao, Jiajie; Fei, Jingyi; Gonzalez, Ruben L.; Gopich, Irina V.; Ha, Taekjip; Hanke, Christian A.; Haran, Gilad; Hatzakis, Nikos S.; Hohng, Sungchul; Hong, Seok-Cheol; Hugel, Thorsten; Ingargiola, Antonino; Joo, Chirlmin; Kapanidis, Achillefs N.; Kim, Harold D.; Laurence, Ted; Lee, Nam Ki; Lee, Tae-Hee; Lemke, Edward A.; Margeat, Emmanuel; Michaelis, Jens; Michalet, Xavier; Myong, Sua; Nettels, Daniel; Peulen, Thomas-Otavio; Ploetz, Evelyn; Razvag, Yair; Robb, Nicole C.; Schuler, Benjamin; Soleimaninejad, Hamid; Tang, Chun; Vafabakhsh, Reza; Lamb, Don C.; Am Seidel, Claus und Weiss, Shimon
(2021):
FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.
In: eLife, Bd. 10, e60416
[PDF, 6MB]
ORCID: https://orcid.org/0000-0002-8598-5499; Craggs, Timothy D.; Deniz, Ashok A.; Diao, Jiajie; Fei, Jingyi; Gonzalez, Ruben L.; Gopich, Irina V.; Ha, Taekjip; Hanke, Christian A.; Haran, Gilad; Hatzakis, Nikos S.; Hohng, Sungchul; Hong, Seok-Cheol; Hugel, Thorsten; Ingargiola, Antonino; Joo, Chirlmin; Kapanidis, Achillefs N.; Kim, Harold D.; Laurence, Ted; Lee, Nam Ki; Lee, Tae-Hee; Lemke, Edward A.; Margeat, Emmanuel; Michaelis, Jens; Michalet, Xavier; Myong, Sua; Nettels, Daniel; Peulen, Thomas-Otavio; Ploetz, Evelyn; Razvag, Yair; Robb, Nicole C.; Schuler, Benjamin; Soleimaninejad, Hamid; Tang, Chun; Vafabakhsh, Reza; Lamb, Don C.; Am Seidel, Claus und Weiss, Shimon
(2021):
FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.
In: eLife, Bd. 10, e60416
[PDF, 6MB]
Lerner, Eitan; Cordes, Thorben; Ingargiola, Antonino; Alhadid, Yazan; Chung, SangYoon; Michalet, Xavier und Weiss, Shimon
(2018):
Toward dynamic structural biology: Two decades of single-molecule Forster resonance energy transfer.
In: Science, Bd. 359, Nr. 6373, eaan1133
Mächtel, Rebecca; Gebhardt, Christian und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2018):
Konformationsbewegungen von aktiven Membrantransportern.
In: BIOspektrum, Bd. 24, Nr. 5: S. 495-497
[PDF, 447kB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2018):
Konformationsbewegungen von aktiven Membrantransportern.
In: BIOspektrum, Bd. 24, Nr. 5: S. 495-497
[PDF, 447kB]
Mächtel, Rebecca; Narducci, Alessandra; Griffith, Douglas A.; Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499 und Orelle, Cédric
(November 2019):
An integrated transport mechanism of the maltose ABC importer.
In: Research in microbiology, Bd. 170, Nr. 8: S. 321-337
[PDF, 3MB]
ORCID: https://orcid.org/0000-0002-8598-5499 und Orelle, Cédric
(November 2019):
An integrated transport mechanism of the maltose ABC importer.
In: Research in microbiology, Bd. 170, Nr. 8: S. 321-337
[PDF, 3MB]
Robb, Nicole C.; Velthuis, Aartjan J. W. te; Wieneke, Ralph; Tampé, Robert; Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499; Fodor, Ervin und Kapanidis, Achillefs N.
(2016):
Single-molecule FRET reveals the pre-initiation and initiation conformations of influenza virus promoter RNA.
In: Nucleic acids research, Bd. 44, Nr. 21: S. 10304-10315
[PDF, 4MB]
ORCID: https://orcid.org/0000-0002-8598-5499; Fodor, Ervin und Kapanidis, Achillefs N.
(2016):
Single-molecule FRET reveals the pre-initiation and initiation conformations of influenza virus promoter RNA.
In: Nucleic acids research, Bd. 44, Nr. 21: S. 10304-10315
[PDF, 4MB]
Smit, Jochem H.; Li, Yichen; Warszawik, Eliza M.; Herrmann, Andreas und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
ColiCoords: A Python package for the analysis of bacterial fluorescence microscopy data.
In: PloS one 14(6), e0217524 [PDF, 2MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
ColiCoords: A Python package for the analysis of bacterial fluorescence microscopy data.
In: PloS one 14(6), e0217524 [PDF, 2MB]
Smit, Jochem H. ORCID: https://orcid.org/0000-0002-3597-9429; Velde, Jasper H. M. van der; Huang, Jingyi; Trauschke, Vanessa; Henrikus, Sarah S.; Chen, Si; Eleftheriadis, Nikolaos; Warszawik, Eliza M.; Herrmann, Andreas ORCID: https://orcid.org/0000-0002-8886-0894 und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
On the impact of competing intra- and intermolecular triplet-state quenching on photobleaching and photoswitching kinetics of organic fluorophores.
In: Physical chemistry chemical physics : PCCP, Bd. 21, Nr. 7: S. 3721-3733
[PDF, 4MB]
ORCID: https://orcid.org/0000-0002-3597-9429; Velde, Jasper H. M. van der; Huang, Jingyi; Trauschke, Vanessa; Henrikus, Sarah S.; Chen, Si; Eleftheriadis, Nikolaos; Warszawik, Eliza M.; Herrmann, Andreas ORCID: https://orcid.org/0000-0002-8886-0894 und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
On the impact of competing intra- and intermolecular triplet-state quenching on photobleaching and photoswitching kinetics of organic fluorophores.
In: Physical chemistry chemical physics : PCCP, Bd. 21, Nr. 7: S. 3721-3733
[PDF, 4MB]
Tassis, Konstantinos; Vietrov, Ruslan; Koning, Matthijs de; Boer, Marijn de; Gouridis, Giorgos und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2021):
Single-molecule studies of conformational states and dynamics in the ABC importer OpuA.
In: FEBS letters, Bd. 595, Nr. 6: S. 717-734
[PDF, 1MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2021):
Single-molecule studies of conformational states and dynamics in the ABC importer OpuA.
In: FEBS letters, Bd. 595, Nr. 6: S. 717-734
[PDF, 1MB]
Velde, Jasper H. M. van der; Smit, Jochem H. ORCID: https://orcid.org/0000-0002-3597-9429; Hebisch, Elke; Trauschke, Vanessa; Punter, Michiel und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
Self-healing dyes for super-resolution fluorescence microscopy.
In: Journal of Physics D: Applied Physics, Bd. 52, Nr. 3, 034001
[PDF, 7MB]
ORCID: https://orcid.org/0000-0002-3597-9429; Hebisch, Elke; Trauschke, Vanessa; Punter, Michiel und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2019):
Self-healing dyes for super-resolution fluorescence microscopy.
In: Journal of Physics D: Applied Physics, Bd. 52, Nr. 3, 034001
[PDF, 7MB]
Velde, Jens van der; Oelerich, Jens; Huang, Jingyi; Smit, Jochem H.; Jazi, Atieh Aminian; Galiani, Silvia; Kolmakov, Kirill; Guoridis, Giorgos; Eggeling, Christian; Herrmann, Andreas; Roelfes, Gerard und Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499
(2016):
A simple and versatile design concept for fluorophore derivatives with intramolecular photostabilization.
In: Nature communications, Bd. 7, 10144
[PDF, 1MB]
ORCID: https://orcid.org/0000-0002-8598-5499
(2016):
A simple and versatile design concept for fluorophore derivatives with intramolecular photostabilization.
In: Nature communications, Bd. 7, 10144
[PDF, 1MB]
Department Chemie
Jazi, Atieh Aminian; Plötz, Evelyn; Arizki, Muhamad; Dhandayuthapani, Balasubramaniam; Waclawska, Izabela; Kramer, Reinhard; Ziegler, Christine und Cordes, Thorben
(2017):
Caging and Photoactivation in Single-Molecule Forster Resonance Energy Transfer Experiments.
In: Biochemistry, Bd. 56, Nr. 14: S. 2031-2041
[PDF, 3MB]
Lerner, Eitan; Ploetz, Evelyn; Hohlbein, Johannes; Cordes, Thorben und Weiss, Shimon
(2016):
A Quantitative Theoretical Framework For Protein-Induced Fluorescence Enhancement-Forster-Type Resonance Energy Transfer (PIFE-FRET).
In: Journal of Physical Chemistry B, Bd. 120, Nr. 26: S. 6401-6410
Ploetz, Evelyn; Lerner, Eitan; Husada, Florence; Roelfs, Martin; Chung, SangYoon; Hohlbein, Johannes; Weiss, Shimon und Cordes, Thorben
(2016):
Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multiscale molecular rulers.
In: Scientific Reports, Bd. 6, 33257
[PDF, 2MB]
Physik
Kolbeck, Pauline J.; Vanderlinden, Willem; Gemmecker, Gerd; Gebhardt, Christian; Lehmann, Martin; Lak, Aidin; Nicolaus, Thomas; Cordes, Thorben ORCID: https://orcid.org/0000-0002-8598-5499 und Lipfert, Jan
(2021):
Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold.
In: Nucleic acids research, Bd. 49, Nr. 9: S. 5143-5158
[PDF, 2MB]
ORCID: https://orcid.org/0000-0002-8598-5499 und Lipfert, Jan
(2021):
Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold.
In: Nucleic acids research, Bd. 49, Nr. 9: S. 5143-5158
[PDF, 2MB]