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Journal article

Pichler, Alexander ORCID logoORCID: https://orcid.org/0000-0002-9842-0155; Hillmeier, Markus; Heiss, Matthias ORCID logoORCID: https://orcid.org/0000-0002-6770-9511; Peev, Elsa; Xefteris, Stylianos; Steigenberger, Barbara; Thoma, Ines; Müller, Markus ORCID logoORCID: https://orcid.org/0000-0002-3579-3317; Borso, Marco ORCID logoORCID: https://orcid.org/0000-0001-7467-7960; Imhof, Axel ORCID logoORCID: https://orcid.org/0000-0003-2993-8249 and Carell, Thomas ORCID logoORCID: https://orcid.org/0000-0001-7898-2831 (15. November 2023): Synthesis and Structure Elucidation of Glutamyl-Queuosine. In: Journal of the American Chemical Society, Vol. 145, No. 47: pp. 25528-25532 [PDF, 2MB]

Venkatasubramani, Anuroop Venkateswaran ORCID logoORCID: https://orcid.org/0000-0003-2119-8741; Ichinose, Toshiharu; Kanno, Mai; Forne, Ignasi ORCID logoORCID: https://orcid.org/0000-0003-0309-907X; Tanimoto, Hiromu; Peleg, Shahaf ORCID logoORCID: https://orcid.org/0000-0003-2646-3807 and Imhof, Axel ORCID logoORCID: https://orcid.org/0000-0003-2993-8249 (2023): The fruit fly acetyltransferase chameau promotes starvation resilience at the expense of longevity. In: EMBO reports, Vol. 24, No. 10 [PDF, 2MB]

Bachmaier, Sabine; Giacomelli, Giacomo; Calvo-Alvarez, Estefanía; Rezende Vieira, Larissa; Abbeele, Jan Van Den; Aristodemou, Aris; Lorentzen, Esben; Gould, Matt K.; Brennand, Ana; Dupuy, Jean-William; Forné, Ignasi; Imhof, Axel; Bramkamp, Marc; Salmon, Didier; Rotureau, Brice and Boshart, Michael (16. September 2022): A multi-adenylate cyclase regulator at the flagellar tip controls African trypanosome transmission. In: Nature Communications, Vol. 13 [PDF, 3MB]

Qin, Weihua; Steinek, Clemens; Kolobynina, Ksenia; Forne, Ignasi; Imhof, Axel; Cardoso, M. Cristina and Leonhardt, Heinrich (2022): Probing protein ubiquitination in live cells. In: Nucleic Acids Research, Vol. 50, No. 21 [PDF, 8MB]

Aftab, Wasim; Lahiri, Shibojyoti and Imhof, Axel (2022): ImShot: An Open-Source Software for Probabilistic Identification of Proteins In Situ and Visualization of Proteomics Data. In: Molecular & Cellular Proteomics, Vol. 21, No. 6 [PDF, 3MB]

Sun, Bo; Smialowski, Pawel; Aftab, Wasim; Schmidt, Andreas; Forne, Ignasi; Straub, Tobias and Imhof, Axel ORCID logoORCID: https://orcid.org/0000-0003-2993-8249 (2022): Improving SWATH-MS analysis by deep-learning. In: Proteomics, Vol. 23, No. 9 [PDF, 2MB]

Lukacs, Andrea ORCID logoORCID: https://orcid.org/0000-0002-9690-851X; Thomae, Andreas W. ORCID logoORCID: https://orcid.org/0000-0003-3156-9075; Krueger, Peter ORCID logoORCID: https://orcid.org/0000-0002-0461-0645; Schauer, Tamas ORCID logoORCID: https://orcid.org/0000-0001-9602-4557; Venkatasubramani, Anuroop V. ORCID logoORCID: https://orcid.org/0000-0003-2119-8741; Kochanova, Natalia Y. ORCID logoORCID: https://orcid.org/0000-0001-9951-8333; Aftab, Wasim; Choudhury, Rupam; Forne, Ignasi ORCID logoORCID: https://orcid.org/0000-0003-0309-907X and Imhof, Axel ORCID logoORCID: https://orcid.org/0000-0003-2993-8249 (2021): The Integrity of the HMR complex is necessary for centromeric binding and reproductive isolation in Drosophila.
In: PLOS Genetics 17(8), e1009744 [PDF, 3MB]

Groh, Sophia; Milton, Anna Viktoria; Marinelli, Lisa Katherina; Sickinger, Cara V.; Russo, Angela; Bollig, Heike; de Almeida, Gustavo Pereira; Schmidt, Andreas; Forné, Ignasi; Imhof, Axel and Schotta, Gunnar (2021): Morc3 silences endogenous retroviruses by enabling Daxx-mediated histone H3.3 incorporation. In: Nature Communications, Vol. 12, No. 1, 5996 [PDF, 4MB]

Friedrich, Verena; Forne, Ignasi; Matzek, Dana; Ring, Diana; Popper, Bastian; Jochum, Lara; Spriewald, Stefanie; Straub, Tobias; Imhof, Axel; Krug, Anne; Stecher, Bärbel and Brocker, Thomas (2021): Helicobacter hepaticus is required for immune targeting of bacterial heat shock protein 60 and fatal colitis in mice. In: Gut Microbes, Vol. 13, No. 1

Groh, Sophia; Milton, Anna Viktoria; Marinelli, Lisa; Sickinger, Cara; Russo, Angela; Bollig, Heike; Almeida, Gustavo Pereira de; Schmidt, Andreas; Forne, Ignasi; Imhof, Axel and Schotta, Gunnar (2021): Morc3 silences endogenous retroviruses by enabling Daxx-mediated histone H3.3 incorporation. In: Nature Communications, Vol. 12, No. 1, 5996

Hayn, Manuel; Hirschenberger, Maximilian; Koepke, Lennart; Nchioua, Rayhane; Straub, Jan Hendrik; Klute, Susanne; Hunszinger, Victoria; Zech, Fabian; Bozzo, Caterina Prelli; Aftab, Wasim; Christensen, Maria Honholt; Conzelmann, Carina; Mueller, Janis Alexander; Badarinarayan, Smitha Srinivasachar; Stuerzel, Christina Martina; Forne, Ignasi; Stenger, Steffen; Conzelmann, Karl-Klaus; Muench, Jan; Schmidt, Florian Ingo; Sauter, Daniel; Imhof, Axel; Kirchhoff, Frank and Sparrer, Konstantin Maria Johannes (2021): Systematic functional analysis of SARS-CoV-2 proteins uncovers viral innate immune antagonists and remaining vulnerabilities. In: Cell Reports, Vol. 35, No. 7, 109126

Lahiri, Shibojyoti; Aftab, Wasim; Walenta, Lena; Strauss, Leena; Poutanen, Matti; Mayerhofer, Artur and Imhof, Axel (2021): MALDI-IMS combined with shotgun proteomics identify and localize new factors in male infertility. In: Life Science Alliance, Vol. 4, No. 3, e202000672

Murenu, Elisa; Kostidis, Sarantos; Lahiri, Shibojyoti; Geserich, Anna S.; Imhof, Axel; Giera, Martin and Michalakis, Stylianos (2021): Metabolic Analysis of Vitreous/Lens and Retina in Wild Type and Retinal Degeneration Mice. In: International Journal of Molecular Sciences, Vol. 22, No. 5, 2345

Pokrovsky, Daniil; Forne, Ignasi; Straub, Tobias; Imhof, Axel and Rupp, Ralph A. W. (2021): A systemic cell cycle block impacts stage-specific histone modification profiles during Xenopus embryogenesis.
In: PLOS Biology 19(9), e3001377

Nakamura, Kyosuke; Kustatscher, Georg; Alabert, Constance; Hoedl, Martina; Forne, Ignasi; Voelker-Albert, Moritz; Satpathy, Shankha; Beyer, Tracey E.; Mailand, Niels; Choudhary, Chunaram; Imhof, Axel; Rappsilber, Juri and Groth, Anja (2021): Proteome dynamics at broken replication forks reveal a distinct ATM-directed repair response suppressing DNA double-strand break ubiquitination. In: Molecular Cell, Vol. 81, No. 5

Qin, Weihua; Ugur, Enes; Mulholland, Christopher B.; Bultmann, Sebastian; Solovei, Irina; Modic, Miha; Smets, Martha; Wierer, Michael; Forne, Ignasi; Imhof, Axel; Cardoso, M. Cristina and Leonhardt, Heinrich (2021): Phosphorylation of the HP1 beta hinge region sequesters KAP1 in heterochromatin and promotes the exit from naive pluripotency. In: Nucleic Acids Research, Vol. 49, No. 13: pp. 7406-7423

Rackles, Elisabeth; Witting, Michael; Forne, Ignasi; Zhang, Xing; Zacherl, Judith; Schrott, Simon; Fischer, Christian; Ewbank, Jonathan J.; Osman, Christof; Imhof, Axel and Rolland, Stephane G. (2021): Reduced peroxisomal import triggers peroxisomal retrograde signaling. In: Cell Reports, Vol. 34, No. 3, 108653

Rudolf, Eva Esther; Huether, Patrick; Forne, Ignasi; Georgii, Elisabeth; Han, Yongtao; Hell, Ruediger; Wirtz, Markus; Imhof, Axel; Becker, Claude; Durner, Joerg and Lindermayr, Christian (2021): GSNOR Contributes to Demethylation and Expression of Transposable Elements and Stress-Responsive Genes. In: Antioxidants, Vol. 10, No. 7, 1128

Schieweck, Rico; Riedemann, Therese; Forne, Ignasi; Harner, Max; Bauer, Karl E.; Rieger, Daniela; Ang, Foong Yee; Hutten, Saskia; Demleitner, Antonia F.; Popper, Bastian; Derdak, Sophia; Sutor, Bernd; Bilban, Martin; Imhof, Axel and Kiebler, Michael A. (2021): Pumilio2 and Staufen2 selectively balance the synaptic proteome. In: Cell Reports, Vol. 35, No. 12, 109279

Schumski, Ariane; Ortega-Gomez, Almudena; Wichapong, Kanin; Winter, Carla; Lemnitzer, Patricia; Viola, Joana R.; Pinilla-Vera, Mayra; Folco, Eduardo; Solis-Mezarino, Victor; Volker-Albert, Moritz; Maas, Sanne L.; Pan, Chang; Olivares, Laura Perez; Winter, Janine; Hackeng, Tilman; Karlsson, Mikael C. I.; Zeller, Tanja; Imhof, Axel; Baron, Rebecca M.; Nicolaes, Gerry A. F.; Libby, Peter; Maegdefessel, Lars; Kamp, Frits; Benoit, Martin; Doring, Yvonne and Soehnlein, Oliver (2021): Endotoxinemia Accelerates Atherosclerosis Through Electrostatic Charge-Mediated Monocyte Adhesion. In: Circulation, Vol. 143, No. 3: pp. 254-266

Sun, Bo; Smialowski, Pawel; Straub, Tobias and Imhof, Axel (2021): Investigation and Highly Accurate Prediction of Missed Tryptic Cleavages by Deep Learning. In: Journal of Proteome Research, Vol. 20, No. 7: pp. 3749-3757

Singh, Abeer Prakash; Salvatori, Roger; Aftab, Wasim; Aufschnaiter, Andreas; Carlström, Andreas; Forne, Ignasi; Imhof, Axel and Ott, Martin (2020): Molecular Connectivity of Mitochondrial Gene Expression and OXPHOS Biogenesis. In: Molecular Cell, Vol. 79, No. 6: pp. 1051-1065

Salvatori, Roger; Kehrein, Kirsten; Singh, Abeer Prakash; Aftab, Wasim; Möller-Hergt, Braulio Vargas; Forne, Ignasi; Imhof, Axel and Ott, Martin (2020): Molecular Wiring of a Mitochondrial Translational Feedback Loop. In: Molecular Cell, Vol. 77, No. 4: pp. 887-900

Cervantes, Marlene; Forne, Ignasi; Ranjit, Suman; Gratton, Enrico; Imhof, Axel and Sassone-Corsi, Paolo (2020): BMAL1 Associates with NOP58 in the Nucleolus and Contributes to Pre-rRNA Processing. In: Iscience, Vol. 23, No. 6, 101151

Schuh, Lea; Loos, Carolin; Pokrovsky, Daniil; Imhof, Axel; Rupp, Ralph A. W. and Marr, Carsten (2020): H4K20 Methylation Is Differently Regulated by Dilution and Demethylation in Proliferating and Cell-Cycle-Arrested Xenopus Embryos. In: Cell Systems, Vol. 11, No. 6: pp. 653-662

Alabert, Constance; Loos, Carolin; Voelker-Albert, Moritz; Graziano, Simona; Forne, Ignasi; Reveron-Gomez, Nazaret; Schuh, Lea; Hasenauer, Jan; Marr, Carsten; Imhof, Axel and Groth, Anja (2020): Domain Model Explains Propagation Dynamics and Stability of Histone H3K27 and H3K36 Methylation Landscapes. In: Cell Reports, Vol. 30, No. 4: pp. 1223-1234

Schnatbaum, Karsten; Solis-Mezarino, Victor; Pokrovsky, Daniil; Schaefer, Frederike; Nagl, Dennis; Hornberger, Lars; Zerweck, Johannes; Knaute, Tobias; Avramova-Nehmer, Julia; Schutkowski, Mike; Hornung, Veit; Wenschuh, Holger; Voelker-Albert, Moritz Carl; Imhof, Axel and Reimer, Ulf (2020): New Approaches for Absolute Quantification of Stable-Isotope-Labeled Peptide Standards for Targeted Proteomics Based on a UV Active Tag. In: Proteomics, Vol. 20, No. 10, 2000007

Bobkov, Georg O. M.; Huang, Anming; Berg, Sebastiaan J. W. van den; Mitra, Sreyoshi; Anselm, Eduard; Lazou, Vasiliki; Schunter, Sarah; Feederle, Regina; Imhof, Axel; Lusser, Alexandra; Jansen, Lars E. T. and Heun, Patrick (2020): Spt6 is a maintenance factor for centromeric CENP-A. In: Nature Communications, Vol. 11, No. 1, 2919 [PDF, 4MB]

Bux, Esther Marie; Solis-Mezarino, Victor; Kuhm, Christoph; Northoff, Bernd H.; Karin, Ivan; Klopstock, Thomas; Holdt, Lesca M.; Voelker-Albert, Moritz; Imhof, Axel and Peleg, Shahaf (2020): Determining histone H4 acetylation patterns in human peripheral blood mononuclear cells using mass spectrometry. In: Clinical Mass Spectrometry, Vol. 15: pp. 54-60

Esgleas, Miriam; Falk, Sven; Forné, Ignasi; Thiry, Marc; Najas, Sonia; Zhang, Sirui; Mas‐Sanchez, Aina; Geerlof, Arie; Niessing, Dierk; Wang, Zefeng; Imhof, Axel and Götz, Magdalena ORCID logoORCID: https://orcid.org/0000-0003-1551-9203 (2020): Trnp1 organizes diverse nuclear membrane‐less compartments in neural stem cells. In: EMBO, Vol. 39, No. 16, e103373 [PDF, 6MB]

Voelker-Albert, Moritz; Bronkhorst, Abel; Holdenrieder, Stefan and Imhof, Axel (2020): Histone Modifications in Stem Cell Development and Their Clinical Implications. In: Stem Cell Reports, Vol. 15, No. 6: pp. 1196-1205

Tarazona, Sonia; Balzano-Nogueira, Leandro; Gomez-Cabrero, David; Schmidt, Andreas; Imhof, Axel; Hankemeier, Thomas; Tegner, Jesper; Westerhuis, Johan A. and Conesa, Ana (2020): Harmonization of quality metrics and power calculation in multi-omic studies. In: Nature Communications, Vol. 11, No. 1 [PDF, 2MB]

Kochanova, Natalia Y.; Schauer, Tamas; Mathias, Grusha Primal; Lukacs, Andrea; Schmidt, Andreas; Flatley, Andrew; Schepers, Aloys; Thomae, Andreas W. and Imhof, Axel (2020): A multi-layered structure of the interphase chromocenter revealed by proximity-based biotinylation. In: Nucleic Acids Research, Vol. 48, No. 8: pp. 4161-4178

Greco, Carolina Magdalen; Cervantes, Marlene; Fustin, Jean-Michel; Ito, Kakeru; Ceglia, Nicholas; Samad, Muntaha; Shi, Jiejun; Koronowski, Kevin Brian; Forne, Ignasi; Ranjit, Suman; Gaucher, Jonathan; Kinouchi, Kenichiro; Kojima, Rika; Gratton, Enrico; Li, Wei; Baldi, Pierre; Imhof, Axel; Okamura, Hitoshi and Sassone-Corsi, Paolo (2020): S-adenosyl-L-homocysteine hydrolase links methionine metabolism to the circadian clock and chromatin remodeling. In: Science Advances, Vol. 6, No. 51, eabc5629

Frey, Surina; Schieweck, Rico; Forne, Ignasi; Imhof, Axel; Straub, Tobias; Popper, Bastian and Kiebler, Michael A. (2020): Physical Activity Dynamically Regulates the Hippocampal Proteome along the Dorso-Ventral Axis. In: International Journal of Molecular Sciences, Vol. 21, No. 10

Pinheiro, Bruno; Scheidler, Christopher M.; Kielkowski, Pavel; Schmid, Marina; Forne, Ignasi; Ye, Suhui; Reiling, Norbert; Takano, Eriko; Imhof, Axel; Sieber, Stephan A.; Schneider, Sabine and Jung, Kirsten (2020): Structure and Function of an Elongation Factor P Subfamily in Actinobacteria. In: Cell Reports, Vol. 30, No. 13: pp. 4332-4342

Basch, Marion; Wagner, Mirjam; Rolland, Stephane; Carbonell, Andres; Zeng, Rachel; Khosravi, Siavash; Schmidt, Andreas; Aftab, Wasim; Imhof, Axel; Wagener, Johannes; Conradt, Barbara and Wagener, Nikola (2020): Msp1 cooperates with the proteasome for extraction of arrested mitochondrial import intermediates. In: Molecular Biology of the Cell, Vol. 31, No. 8: pp. 753-767

Minderjahn, Julia; Schmidt, Andreas; Fuchs, Andreas; Schill, Rudolf; Raithel, Johanna; Babina, Magda; Schmidl, Christian; Gebhard, Claudia; Schmidhofer, Sandra; Mendes, Karina; Ratermann, Anna; Glatz, Dagmar; Nuetzel, Margit; Edinger, Matthias; Hoffman, Petra; Spang, Rainer; Laengst, Gernot; Imhof, Axel and Rehli, Michael (2020): Mechanisms governing the pioneering and redistribution capabilities of the non-classical pioneer PU.1. In: Nature Communications, Vol. 11, No. 1, 402 [PDF, 3MB]

Böhm, Kati; Giacomelli, Giacomo; Schmidt, Andreas; Imhof, Axel; Koszul, Romain; Marbouty, Martial and Bramkamp, Marc (2020): Chromosome organization by a conserved condensin-ParB system in the actinobacterium Corynebacterium glutamicum. In: Nature Communications, Vol. 11, No. 1, 1485 [PDF, 4MB]

Serefidou, Magdalini; Venkatasubramani, Anuroop Venkateswaran and Imhof, Axel (28. August 2019): The Impact of One Carbon Metabolism on Histone Methylation. In: Frontiers in Genetics, Vol. 10, 764 [PDF, 888kB]

Gauchier, Mathilde; Kan, Sophie; Barral, Amandine; Sauzet, Sandrine; Agirre, Eneritz; Bonnell, Erin; Saksouk, Nehme; Barth, Teresa K.; Ide, Satoru; Urbach, Serge; Wellinger, Raymund J.; Luco, Reini F.; Imhof, Axel and Dejardin, Jerome (2019): SETDB1-dependent heterochromatin stimulates alternative lengthening of telomeres. In: Science Advances, Vol. 5, No. 5, eaav3673

Bachmaier, Sabine; Santos, Yuri Volpato; Kramer, Susanne; Githure, George Boniface; Kloeckner, Thomas; Pepperl, Julia; Baums, Cordula; Schenk, Robin; Schwede, Frank; Genieser, Hans-Gottfried; Dupuy, Jean-William; Forne, Ignasi; Imhof, Axel; Basquin, Jerome; Lorentzen, Esben and Boshart, Michael (2019): Nucleoside analogue activators of cyclic AMP-independent protein kinase A of Trypanosoma. In: Nature Communications, Vol. 10, 1421 [PDF, 1MB]

Dietz, Louisa Jutta; Venkatasubramani, Anuroop Venkateswaran; Müller-Eigner, Annika; de Angelis, Martin Hrabe; Imhof, Axel; Becker, Lore and Peleg, Shahaf (2019): Measuring and Interpreting Oxygen Consumption Rates in Whole Fly Head Segments. In: Jove-Journal of Visualized Experiments, No. 143, e58601

Ammar, Constantin; Berchtold, Evi; Csaba, Gergely; Schmidt, Andreas; Imhof, Axel and Zimmer, Ralf (2019): Multi-Reference Spectral Library Yields Almost Complete Coverage of Heterogeneous LC-MS/MS Data Sets. In: Journal of Proteome Research, Vol. 18, No. 4: pp. 1553-1566

Rohrmoser, Michaela; Kluge, Michael; Yahia, Yousra; Gruber-Eber, Anita; Maqbool, Muhammad Ahmad; Forne, Ignasi; Krebs, Stefan; Blum, Helmut; Greifenberg, Ann Katrin; Geyer, Matthias; Descostes, Nicolas; Imhof, Axel; Andrau, Jean-Christophe; Friedel, Caroline C. and Eick, Dirk (2019): MIR sequences recruit zinc finger protein ZNF768 to expressed genes. In: Nucleic Acids Research, Vol. 47, No. 2: pp. 700-715

van Emden, Thomas S.; Forn, Marta; Forne, Ignasi; Sarkadi, Zsuzsa; Capella, Matias; Caballero, Lucia Martin; Fischer-Burkart, Sabine; Broenner, Cornelia; Simonetta, Marco; Toczyski, David; Halic, Mario; Imhof, Axel and Braun, Sigurd (2019): Shelterin and subtelomeric DNA sequences control nucleosome maintenance and genome stability. In: EMBO Reports, Vol. 20, No. 1, e47181

Metzger, Eric; Wang, Sheng; Urban, Sylvia; Willmann, Dominica; Schmidt, Andreas; Offermann, Anne; Allen, Anita; Sum, Manuela; Obier, Nadine; Cottard, Felicie; Ulferts, Svenja; Preca, Bogdan-Tiberius; Hermann, Bianca; Maurer, Jochen; Greschik, Holger; Hornung, Veit; Einsle, Oliver; Perner, Sven; Imhof, Axel; Jung, Manfred and Schuele, Roland (2019): KMT9 monomethylates histone H4 lysine 12 and controls proliferation of prostate cancer cells. In: Nature Structural & Molecular Biology, Vol. 26, No. 5

Harpprecht, Lisa; Baldi, Sandro; Schauer, Tamas; Schmidt, Andreas; Bange, Tanja; Robles, Maria S.; Kremmer, Elisabeth; Imhof, Axel and Becker, Peter B. (2019): A Drosophila cell-free system that senses DNA breaks and triggers phosphorylation signalling. In: Nucleic Acids Research, Vol. 47, No. 14: pp. 7444-7459

Cooper, Jacob Carter; Lukacs, Andrea; Reich, Shelley; Schauer, Tamas; Imhof, Axel and Phadnis, Nitin (2019): Altered Localization of Hybrid Incompatibility Proteins in Drosophila. In: Molecular Biology and Evolution, Vol. 36, No. 8: pp. 1783-1792

Gomez-Cabrero, David; Tarazona, Sonia; Ferreiros-Vidal, Isabel; Ramirez, Ricardo N.; Company, Carlos; Schmidt, Andreas; Reijmers, Theo; Saint Paul, Veronica von; Marabita, Francesco; Rodriguez-Ubreva, Javier; Garcia-Gomez, Antonio; Carroll, Thomas; Cooper, Lee; Liang, Ziwei; Dharmalingam, Gopuraja; van der Kloet, Frans; Harms, Amy C.; Balzano-Nogueira, Leandro; Lagani, Vincenzo; Tsamardinos, Ioannis; Lappe, Michael; Maier, Dieter; Westerhuis, Johan A. .; Hankemeier, Thomas; Imhof, Axel; Ballestar, Esteban; Mortazavi, Ali; Merkenschlager, Matthias; Egner, Jesper T. and Conesa, Ana (2019): STATegra, a comprehensive multi-omics dataset of B-cell differentiation in mouse. In: Scientific Data, Vol. 6, 256

Bonnet, Jacques; Lindeboom, Rik G. H.; Pokrovsky, Daniil; Stricker, Georg; Celik, Muhammed Hasan; Rupp, Ralph A. W.; Gagneur, Julien; Vermeulen, Michiel; Imhof, Axel and Müller, Juerg (2019): Quantification of Proteins and Histone Marks in Drosophila Embryos Reveals Stoichiometric Relationships Impacting Chromatin Regulation. In: Developmental Cell, Vol. 51, No. 5

Gaucher, Jonathan; Kinouchi, Kenichiro; Ceglia, Nicholas; Montellier, Emilie; Peleg, Shahaf; Greco, Carolina Magdalen; Schmidt, Andreas; Forne, Ignasi; Masri, Selma; Baldi, Pierre; Imhof, Axel and Sassone-Corsi, Paolo (2019): Distinct metabolic adaptation of liver circadian pathways to acute and chronic patterns of alcohol intake. In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 116, No. 50: pp. 25250-25259

Macinkovic, Igor; Theofel, Ina; Hundertmark, Tim; Kovac, Kristina; Awe, Stephan; Lenz, Jonathan; Forne, Ignasi; Lamp, Boris; Nist, Andrea; Imhof, Axel; Stiewe, Thorsten; Renkawitz-Pohl, Renate; Rathke, Christina and Brehm, Alexander (2019): Distinct CoREST complexes act in a cell-type-specific manner. In: Nucleic Acids Research, Vol. 47, No. 22: pp. 11649-11666

Lauterbach, Mario A.; Hanke, Jasmin E.; Serefidou, Magdalini; Mangan, Matthew S. J.; Kolbe, Carl-Christian; Hess, Timo; Rothe, Maximilian; Kaiser, Romina; Hoss, Florian; Gehlen, Jan; Engels, Gudrun; Kreutzenbeck, Maike; Schmidt, Susanne V.; Christ, Anette; Imhof, Axel; Hiller, Karsten and Latz, Eicke (2019): Toll-like Receptor Signaling Rewires Macrophage Metabolism and Promotes Histone Acetylation via ATP-Citrate Lyase. In: Immunity, Vol. 51, No. 6

Harrer, Nadine; Schindler, Christina E. M.; Bruetzel, Linda K.; Forne, Ignasi; Ludwigsen, Johanna; Imhof, Axel; Zacharias, Martin; Lipfert, Jan and Müller-Planitz, Felix (2018): Structural Architecture of the Nucleosome Remodeler ISWI Determined from Cross-Linking, Mass Spectrometry, SAXS, and Modeling. In: Structure, Vol. 26, No. 2: pp. 282-294

Schmaehling, Sigrun; Meiler, Arno; Lee, Yoonjung; Mohammed, Arif; Finkl, Katja; Tauscher, Katharina; Israel, Lars; Wirth, Marc; Philippou-Massier, Julia; Blum, Helmut; Habermann, Bianca; Imhof, Axel; Song, Ji-Joon and Müller, Juerg (2018): Regulation and function of H3K36 di-methylation by the trithorax-group protein complex AMC. In: Development, Vol. 145, No. 7

Möller-Hergt, Braulio Vargas; Carlström, Andreas; Stephan, Katharina; Imhof, Axel and Ott, Martin (2018): The ribosome receptors Mrx15 and Mba1 jointly organize cotranslational insertion and protein biogenesis in mitochondria. In: Molecular Biology of the Cell, Vol. 29, No. 20: pp. 2386-2396 [PDF, 2MB]

Tzika, Evangelia; Dreker, Tobias and Imhof, Axel (2018): Epigenetics and Metabolism in Health and Disease. In: Frontiers in Genetics, Vol. 9, 361 [PDF, 571kB]

Link, Stephanie; Spitzer, Ramona M. M.; Sana, Maryam; Torrado, Mario; Völker-Albert, Moritz C.; Keilhauer, Eva C.; Burgold, Thomas; Pünzeler, Sebastian; Low, Jason K. K.; Lindström, Ida; Nist, Andrea; Regnard, Catherine; Stiewe, Thorsten; Hendrich, Brian; Imhof, Axel; Mann, Matthias; Mackay, Joel P.; Bartkuhn, Marek and Hake, Sandra B. (2018): PWWP2A binds distinct chromatin moieties and interacts with an MTA1-specific core NuRD complex. In: Nature Communications, Vol. 9, 4300 [PDF, 8MB]

Shah, Nilay; Maqbool, Muhammad Ahmad; Yahia, Yousra; El Aabidine, Amal Zine; Esnault, Cyril; Forne, Ignasi; Decker, Tim-Michael; Martin, David; Schüller, Roland; Krebs, Stefan; Blum, Helmut; Imhof, Axel; Eick, Dirk and Andrau, Jean-Christophe (2018): Tyrosine-1 of RNA Polymerase II CTD Controls Global Termination of Gene Transcription in Mammals. In: Molecular Cell, Vol. 69, No. 1: pp. 48-61

Gerland, Thomas Andreas; Sun, Bo; Smialowski, Pawel; Lukacs, Andrea; Thomae, Andreas Walter and Imhof, Axel (2017): The Drosophila speciation factor HMR localizes to genomic insulator sites.
In: PLOS One 12(2), e0171798 [PDF, 3MB]

Saavedra, Francisco; Rivera, Carlos; Rivas, Elizabeth; Merino, Paola; Garrido, Daniel; Hernandez, Sergio; Forne, Ignasi; Vassias, Isabelle; Gurard-Levin, Zachary A.; Alfaro, Ivan E.; Imhof, Axel; Almouzni, Genevieve and Loyola, Alejandra (2017): PP32 and SET/TAF-I beta proteins regulate the acetylation of newly synthesized histone H4. In: Nucleic Acids Research, Vol. 45, No. 20: pp. 11700-11710

Schinner, Camilla; Vielmuth, Franziska; Radeva, Mariya; Schmidt, Andreas; Imhof, Axel and Waschke, Jens (2017): Phosphorylation of Plakoglobin at S665 is Essential for Positive Adhesiotropy in Cardiomyocytes. In: FASEB Journal, Vol. 31

Douet, Julien; Corujo, David; Malinverni, Roberto; Renauld, Justine; Sansoni, Viola; Posavec Marjanovic, Melanija; Cantarino, Neus; Valero, Vanesa; Mongelard, Fabien; Bouvet, Philippe; Imhof, Axel; Thiry, Marc and Buschbeck, Marcus (2017): MacroH2A histone variants maintain nuclear organization and heterochromatin architecture. In: Journal of Cell Science, Vol. 130, No. 9: pp. 1570-1582

Pick, Robert; Begandt, Daniela; Stocker, Thomas J.; Salvermoser, Melanie; Thome, Sarah; Böttcher, Ralph T.; Montanez, Eloi; Harrison, Ute; Forne, Ignasi; Khandoga, Alexander G.; Coletti, Raffaele; Weckbach, Ludwig T.; Brechtefeld, Doris; Haas, Rainer; Imhof, Axel; Massberg, Steffen; Sperandio, Markus and Walzog, Barbara (2017): Coronin 1A, a novel player in integrin biology, controls neutrophil trafficking in innate immunity. In: Blood, Vol. 130, No. 7: pp. 847-858

Pogoda, Kristin; Mannell, Hanna; Blodow, Stephanie; Schneider, Holger; Schubert, Kai Michael; Qiu, Jiehua; Schmidt, Andreas; Imhof, Axel; Beck, Heike; Tanase, Laurentia Irina; Pfeifer, Alexander; Pohl, Ulrich and Kameritsch, Petra (2017): NO Augments Endothelial Reactivity by Reducing Myoendothelial Calcium Signal Spreading A Novel Role for Cx37 (Connexin 37) and the Protein Tyrosine Phosphatase SHP-2. In: Arteriosclerosis thrombosis and Vascular Biology, Vol. 37, No. 12: pp. 2280-2290

Schinner, Camilla; Vielmuth, Franziska; Rötzer, Vera; Hiermaier, Matthias; Radeva, Mariya Y.; Co, Thu Kim; Hartlieb, Eva; Schmidt, Andreas; Imhof, Axel; Messoudi, Ahmed; Horn, Anja; Schlipp, Angela; Spindler, Volker and Waschke, Jens (2017): Adrenergic Signaling Strengthens Cardiac Myocyte Cohesion. In: Circulation Research, Vol. 120, No. 8: pp. 1305-1317

Golia, Barbara; Moeller, Giuliana Katharina; Jankevicius, Gytis; Schmidt, Andreas; Hegele, Anna; Preißer, Julia; Tran, Mai Ly; Imhof, Axel and Timinszky, Gyula (2017): ATM induces MacroD2 nuclear export upon DNA damage. In: Nucleic Acids Research, Vol. 45, No. 1: pp. 244-254 [PDF, 3MB]

Peleg, Shahaf; Feller, Christian; Ladurner, Andreas G. and Imhof, Axel (2016): The Metabolic Impact on Histone Acetylation and Transcription in Ageing. In: Trends in Biochemical Sciences, Vol. 41, No. 8: pp. 700-711

Lahiri, Shibojyoti; Sun, Na; Solis-Mezarino, Victor; Fedisch, Andreas; Ninkovic, Jovica; Feuchtinger, Annette; Götz, Magdalena; Walch, Axel and Imhof, Axel (2016): In situ detection of histone variants and modifications in mouse brain using imaging mass spectrometry. In: Proteomics, Vol. 16, No. 3: pp. 437-447

Blasi, Thomas; Feller, Christian; Feigelman, Justin; Hasenauer, Jan; Imhof, Axel; Theis, Fabian J.; Becker, Peter B. ORCID logoORCID: https://orcid.org/0000-0001-7186-0372 and Marr, Carsten (2016): Combinatorial Histone Acetylation Patterns Are Generated by Motif-Specific Reactions. In: Cell Systems, Vol. 2, No. 1: pp. 49-58

Schüller, Roland; Forné, Ignasi; Straub, Tobias; Schreieck, Amelie; Texier, Yves; Shah, Nilay; Decker, Tim-Michael; Cramer, Patrick; Imhof, Axel and Eick, Dirk (2016): Heptad-Specific Phosphorylation of RNA Polymerase II CTD. In: Molecular Cell, Vol. 61, No. 2: pp. 305-314

Völker-Albert, Moritz Carl; Pusch, Miriam Caroline; Fedisch, Andreas; Schilcher, Pierre; Schmidt, Andreas and Imhof, Axel (2016): A Quantitative Proteomic Analysis of In Vitro Assembled Chromatin. In: Molecular & Cellular Proteomics, Vol. 15, No. 3: pp. 945-959

Imhof, Axel and Peleg, Shahaf (2016): From HDACi to KDACi: we need to revisit non-epigenetic pathways affected by inhibiting lysine deacetylases in therapy. In: Embo Reports, Vol. 17, No. 12: p. 1673

Peleg, Shahaf; Feller, Christian; Forne, Ignasi; Schiller, Evelyn; Sévin, Daniel C.; Schauer, Tamas; Regnard, Catherine; Straub, Tobias; Prestel, Matthias; Klima, Caroline; Schmitt Nogueira, Melanie; Becker, Lore; Klopstock, Thomas; Sauer, Uwe; Becker, Peter B. ORCID logoORCID: https://orcid.org/0000-0001-7186-0372; Imhof, Axel and Ladurner, Andreas G. (2016): Life span extension by targeting a link between metabolism and histone acetylation in Drosophila. In: Embo Reports, Vol. 17, No. 3: pp. 455-469

Saredi, Giulia; Huang, Hongda; Hammond, Colin M.; Alabert, Constance; Bekker-Jensen, Simon; Forne, Ignasi; Reverón-Gómez, Nazaret; Foster, Benjamin M.; Mlejnkova, Lucie; Bartke, Till; Cejka, Petr; Mailand, Niels; Imhof, Axel; Patel, Dinshaw J. and Groth, Anja (2016): H4K20me0 marks post-replicative chromatin and recruits the TONSL-MMS22L DNA repair complex. In: Nature, Vol. 534, No. 7609: pp. 714-718

Metzger, Eric; Willmann, Dominica; McMillan, Joel; Forne, Ignasi; Metzger, Philipp; Gerhardt, Stefan; Petroll, Kerstin; Maessenhausen, Anne von; Urban, Sylvia; Schott, Anne-Kathrin; Espejo, Alexsandra; Eberlin, Adrien; Wohlwend, Daniel; Schüle, Katrin M.; Schleicher, Michael; Perner, Sven; Bedford, Mark T.; Jung, Manfred; Dengjel, Jörn; Flaig, Ralf; Imhof, Axel; Einsle, Oliver and Schüle, Roland (2016): Assembly of methylated KDM1A and CHD1 drives androgen receptor-dependent transcription and translocation. In: Nature Structural & Molecular Biology, Vol. 23, No. 2: pp. 132-139

Stutte, Susanne; Schulz, Anna M.; Kugler, Ina; Imhof, Axel; Brakebusch, Cord and Brocker, Thomas (2016): Cell division cycle 42 (Cdc42) regulates functions of plasmacytoid dendritic cells. In: Journal of Immunology, Vol. 196

Lahiri, Shibojyoti; Sun, Na; Buck, Achim; Imhof, Axel and Walch, Axel (2016): MALDI imaging mass spectrometry as a novel tool for detecting histone modifications in clinical tissue samples. In: Expert Review of Proteomics, Vol. 13, No. 3: pp. 275-284

Bosch, Thea van den; Boichenko, Alexander; Leus, Niek G. J.; Ourailidou, Maria E.; Wapenaar, Hannah; Rotili, Dante; Mai, Antonello; Imhof, Axel; Bischoff, Rainer; Haisma, Hidde J. and Dekker, Frank J. (2016): The histone acetyltransferase p300 inhibitor C646 reduces pro-inflammatory gene expression and inhibits histone deacetylases. In: Biochemical Pharmacology, Vol. 102: pp. 130-140

Becker, Peter B. ORCID logoORCID: https://orcid.org/0000-0001-7186-0372; Feller, Christian; Forné, Ignasi and Imhof, Axel (8. January 2015): Global and specific responses of the histone acetylene to systematic perturbation. In: Molecular Cell, Vol. 57: pp. 1-13 [PDF, 4MB]

Rivera, Carlos; Saavedra, Francisco; Alvarez, Francisca; Diaz-Celis, Cesar; Ugalde, Valentina; Li, Jianhua; Forne, Ignasi; Gurard-Levin, Zachary A.; Almouzni, Genevieve; Imhof, Axel and Loyola, Alejandra (2015): Methylation of histone H3 lysine 9 occurs during translation. In: Nucleic Acids Research, Vol. 43, No. 19: pp. 9097-9106 [PDF, 1MB]

Hernando, Henar; Islam, Abul B. M. M. K.; Rodriguez-Ubreva, Javier; Forne, Ignasi; Ciudad, Laura; Imhof, Axel; Shannon-Lowe, Claire and Ballestar, Esteban (2014): Epstein-Barr virus-mediated transformation of B cells induces global chromatin changes independent to the acquisition of proliferation. In: Nucleic Acids Research, Vol. 42, No. 1: pp. 249-263

Schmidt, Andreas; Forne, Ignasi and Imhof, Axel (2014): Bioinformatic analysis of proteomics data. In: BMC Systems Biology 8:S3 [PDF, 585kB]

Sansoni, Viola; Casas-Delucchi, Corella S.; Rajan, Malini; Schmidt, Andreas; Boenisch, Clemens; Thomae, Andreas W.; Staege, Martin S.; Hake, Sandra B.; Cardoso, M. Cristina and Imhof, Axel (2014): The histone variant H2A.Bbd is enriched at sites of DNA synthesis. In: Nucleic Acids Research, Vol. 42, No. 10: pp. 6405-6420

Schmitt, Martin L.; Ladwein, Kathrin I.; Carlino, Luca; Schulz-Fincke, Johannes; Willmann, Dominica; Metzger, Eric; Schilcher, Pierre; Imhof, Axel; Schüle, Roland; Sippl, Wolfgang and Jung, Manfred (2014): Heterogeneous Antibody-Based Activity Assay for Lysine Specific Demethylase 1 (LSD1) on a Histone Peptide Substrate. In: SLAS Discovery, Vol. 19, No. 6: pp. 973-978 [PDF, 804kB]

Guillemette, Benoit; Drogaris, Paul; Lin, Hsiu-Hsu Sophia; Armstrong, Harry; Hiragami-Hamada, Kyoko; Imhof, Axel; Bonneil, Eric; Thibault, Pierre; Verreault, Alain and Festenstein, Richard J. (March 2011): H3 Lysine 4 Is Acetylated at Active Gene Promoters and Is Regulated by H3 Lysine 4 Methylation.
In: PLOS Genetics 7(3), e1001354 [PDF, 3MB]

Boeke, Joern; Bag, Indira; Ramaiah, M. Janaki; Vetter, Irene; Kremmer, Elisabeth; Pal-Bhadra, Manika; Bhadra, Utpal and Imhof, Axel (2011): The RNA helicase Rm62 cooperates with SU(VAR)3-9 to re-silence active transcription in Drosophila melanogaster.
In: PLOS ONE 6(6), e20761 [PDF, 1MB]

Schneider, Tobias D.; Arteaga-Salas, Jose M.; Mentele, Edith; David, Robert; Nicetto, Dario; Imhof, Axel and Rupp, Ralph A. W. (2011): Stage-specific histone modification profiles reveal global transitions in the Xenopus embryonic epigenome.
In: PLOS ONE 6(7), e22548 [PDF, 1MB]

Boeke, Joern; Regnard, Catherine; Cai, Weili; Johansen, Jørgen; Johansen, Kristen M; Becker, Peter B. ORCID logoORCID: https://orcid.org/0000-0001-7186-0372 and Imhof, Axel (6. April 2010): Phosphorylation of SU(VAR)3-9 by the chromosomal kinase JIL-1.
In: PLOS ONE 5(4), e10042 [PDF, 945kB]

Lavigne, Marc; Eskeland, Ragnhild; Azebi, Saliha; Saint-Andre, Violaine; Jang, Suk Min; Batsche, Eric; Fan, Hua-Ying; Kingston, Robert E.; Imhof, Axel and Muchardt, Christian (December 2009): Interaction of HP1 and Brg1/Brm with the Globular Domain of Histone H3 Is Required for HP1-Mediated Repression.
In: PLOS Genetics 5(12), e1000769 [PDF, 772kB]

Hoboth, Christina; Hoffmann, Reinhard; Eichner, Anja; Henke, Chrstine; Schmold, Sabine; Imhof, Axel; Heesemann, Jürgen and Hogardt, Michael (21. May 2009): Dynamics of Adaptive Microevolution of Hypermutable Pseudomonas aeruginosa during Chronic Pulmonary Infection in Patients with Cystic Fibrosis. In: The Journal of Infectious Diseases [PDF, 1MB]

Abel, Jochen; Eskeland, Ragnhild; Raffa, Grazia D; Kremmer, Elisabeth and Imhof, Axel (7. April 2009): Drosophila HP1c is regulated by an auto-regulatory feedback loop through its binding partner Woc.
In: PLOS ONE 4(4), e5089 [PDF, 426kB]

Villar-Garea, Ana and Imhof, Axel (6. February 2008): Fine mapping of posttranslational modifications of the linker histone H1 from Drosophila melanogaster.
In: PLOS ONE 3(2), e1553 [PDF, 900kB]

Pauly, Barbara; Lasi, Margherita; MacKintosh, Carol; Morrice, Nick; Imhof, Axel; Regula, Joerg; Rudd, Stephen; David, Charles N. and Böttger, Angelika (2007): Proteomic screen in the simple metazoan Hydra identifies 14-3-3 binding proteins implicated in cellular metabolism, cytoskeletal organisation and Ca2+ signalling. In: BMC Cell Biology 8:31 [PDF, 1MB]

Book Section

Aftab, Wasim and Imhof, Axel (2021): Discovery of Native Protein Complexes by Liquid Chromatography Followed by Quantitative Mass Spectrometry. In: Colnaghi Simionato, Ana Valéria (ed.) : Separation Techniques Applied to Omics Sciences. Advances in Experimental Medicine and Biology book (PMISB), Vol. 1336. Cham: Springer. pp. 105-128

This list was generated on Sun Feb 18 01:09:53 2024 CET.