Mathematics, Computer Science and Statistics > Statistics > Chairs/Working Groups > Bioimaging

Monograph

Meyer-Baese, Anke; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2014): Pattern Recognition and Signal Analysis in Medical Imaging. 2nd edition. Oxford: Academic Press.

Journal article

Amini Farsani, Zahra; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (20. January 2022): Modified Maximum Entropy Method and Estimating the AIF via DCE-MRI Data Analysis. In: Entropy, Vol. 24, No. 2 [PDF, 673kB]

Copley, Susan; Giannarou, Stamatia; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Hansell, David M.; Yang, Guang-Zhong (2009): Objective evaluation of lung morphology on thin-section CT using fractal dimension analysis: A comparative study between >75 and <55 year old individuals. In: Journal of Thoracic Imaging, Vol. 24, No. 3

Copley, Susan J.; Giannarou, Stamatia; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Hansell, David M.; Wells, Athol U.; Yang, Guang-Zhong (2012): Effect of Aging on Lung Structure In Vivo: Assessment With Densitometric and Fractal Analysis of High-resolution Computed Tomography Data. In: Journal of thoracic imaging, Vol. 27, No. 6: pp. 366-371

Cremer, Marion; Brandstetter, Katharina; Maiser, Andreas; Rao, Suhas S P; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Mitra, Namita; Mamberti, Stefania; Klein, Kyle-N; Gilbert, David M; Leonhardt, Heinrich; Cardoso, Maria Cristina; Aiden, Erez Lieberman; Harz, Hartmann; Cremer, Thomas (2019): Cohesin depleted cells pass through mitosis and reconstitute a functional nuclear architecture. In: Nature Communications, Vol. 11, No. 6146 [PDF, 18MB]

Cremer, Marion; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Kraus, Felix; Markaki, Yolanda; Hellmann, Ines; Maiser, Andreas; Leonhardt, Heinrich; John, Sam; Stamatoyannopoulos, John; Cremer, Thomas (2017): Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters. In: Epigenetics & Chromatin :10:39 [PDF, 5MB]

Erk, Alexander; Trenner, Matthias; Salvermoser, Michael; Reutersberg, Benedikt; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans-Henning; Kühnl, Andreas (19. May 2021): Relationship between regional settlement structure and hospital incidence, type of therapy and mortality of non-ruptured abdominal aortic aneurysms. In: Zeitschrift für Evidenz, Fortbildung und Qualität im Gesundheitswesen, Vol. 163: pp. 38-46

Farsani, Zahra Amini; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (18. September 2020): Co-localization analysis in fluorescence microscopy via maximum entropy copula. In: The International Journal of Biostatistics

Farsani, Zahra Amini; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (November 2017): Maximum Entropy Approach in Dynamic Contrast-Enhanced Magnetic Resonance Imaging. In: Methods of Information in Medicine, Vol. 56, No. 6: pp. 461-468

Feilke, Martina; Bischl, Bernd; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Gertheiss, Jan (2016): Boosting in Nonlinear Regression Models with an Application to DCE-MRI Data. In: Methods of Information in Medicine, Vol. 55, No. 1: pp. 31-41

Feilke, Martina; Schneider, Katrin; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2015): Bayesian mixed-effect models for the analysis of a series of FRAP images. In: Statistical Applications in Genetics and Molecular Biology, Vol. 14, No. 1: pp. 35-51 [PDF, 2MB]

Guzman Castillo, Maria; Gillespie, Duncan; Allen, Kirk; Bandosz, Piotr; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Capewell, Simon; O'Flaherty, Martin (2014): Future declines of Coronary Heart Disease mortality in England and Wales could counter the burden of population ageing.
In: PLOS ONE 9(6), e99482 [PDF, 722kB]

Happ, Clara; Greven, Sonja; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2018): The impact of model assumptions in scalar‐on‐image regression. In: Statistics in Medicine, Vol. 37, No. 28: pp. 4298-4317

Kuehnl, Andreas; Salvermoser, Michael; Erk, Alexander; Trenner, Matthias; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans-Henning (June 2018): Spatial Analysis of Hospital Incidence and in Hospital Mortality of Abdominal Aortic Aneurysms in Germany: Secondary Data Analysis of Nationwide Hospital Episode (DRG) Data. In: European Journal of Vascular and Endovascular Surgery, Vol. 55, No. 6: pp. 852-859

Kuehnl, Andreas; Salvermoser, Michael; Knipfer, Eva; Zimmermann, Andreas; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans-Henning (20. July 2018): Regional frequency variation of revascularization procedures for carotid stenosis in Germany. In: Gefäßchirurgie, Vol. 23, No. Suppl. 2: pp. 56-65

Kuehnl, Andreas; Salvermoser, Michael; Knipfer, Eva; Zimmermann, Andreas; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans-Henning (4. May 2018): Regionale Häufigkeit von revaskularisierenden Prozeduren bei Karotisstenose in Deutschland. In: Gefäßchirurgie, Vol. 23, No. 7: pp. 519-528

Kühnl, Andreas; Erk, Alexander; Trenner, Matthias; Salvermoser, Michael; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans-Henning (2017): Incidence, Treatment and Mortality in Patients with Abdominal Aortic Aneurysms. An Analysis of Hospital Discharge Data from 2005-2014. In: Deutsches Ärzteblatt international, Vol. 114, No. 22-23: pp. 391-398

Lehermeier, Christina; Wimmer, Valentin; Albrecht, Theresa; Auinger, Hans-Jürgen; Gianola, Daniel; Schön, Chris-Carolin; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2013): Sensitivity to Prior Specification in Bayesian Genome-based Prediction Models. In: Statistical Applications in Genetics and Molecular Biology, Vol. 12, No. 3: pp. 375-391 [PDF, 1MB]

Mahaki, Behzad; Jafari-Koshki, Tohid; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2014): Trends of Cancer Incidence in Iran During 2004-2008: A Bayesian Space-Time Model. In: Asian Pacific Journal of Cancer Prevention, Vol. 15, No. 4: pp. 1557-1561

Mahaki, Behzad; Mehrabi, Vadollah; Kavousi, Amir; Akbari, Mohammed E.; Waldhoer, Thomas; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Yaseri, Mehdi (2011): Multivariate Disease Mapping of Seven Prevalent Cancers in Iran using a Shared Component Model. In: Asian Pacific Journal of Cancer Prevention, Vol. 12, No. 9: pp. 2353-2358

Mahaki, Behzad; Mehrabi, Yadollah; Kavousi, Amir; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (1. June 2018): Joint Spatio-temporal Shared Component Model with an Application in Iran Cancer Data. In: Asian Pacific Journal of Cancer Prevention, Vol. 19, No. 6: pp. 1553-1560

Markaki, Yolanda; Smeets, Daniel; Fiedler, Susanne; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Schermelleh, Lothar; Cremer, Thomas; Cremer, Marion (2012): The potential of 3D-FISH and super-resolution structured illumination microscopy for studies of 3D nuclear architecture. In: BioEssays, Vol. 34, No. 5: pp. 412-426

Mohajer, Mojgan; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Braren, Rickmer; Noel, Peter B.; Englmeier, Karl H. (2011): How Heterogeneous is the Liver? A Cluster Analyse of DCE-MRI Time Series. In: NSS-MIC: pp. 2483-2487

Norousi, Ramin; Wickles, Stephan; Leidig, Christoph; Becker, Thomas; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Beckmann, Roland; Tresch, Achim (2013): Automatic post-picking using MAPPOS improves particle image detection from cryo-EM micrographs. In: Journal of Structural Biology, Vol. 182, No. 2: pp. 59-66

Norousi, Ramin; Wickles, Stephan; Leidig, Christoph; Tresch, Achim; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Beckmann, Roland; Becker, Thomas (2013): Automatic post-picking improves particle image detection from Cryo-EM micrographs. In: Journal of Structural Biology, Vol. 182, No. 2: pp. 59-66

Popken, Jens; Brero, Alessandro; Koehler, Daniela; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Strauss, Axel; Wuensch, Annegret; Guengoer, Tuna; Graf, Alexander; Krebs, Stefan; Blum, Helmut; Zakhartchenko, Valeri; Wolf, Eckhard; Cremer, Thomas (2014): Reprogramming of fibroblast nuclei in cloned bovine embryos involves major structural remodeling with both striking similarities and differences to nuclear phenotypes of in vitro fertilized embryos. In: Nucleus, Vol. 5, No. 6: pp. 555-589

Popken, Jens; Dahlhoff, Maik; Guengoer, Tuna; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Strauss, Axel; Cremer, Thomas; Zakhartchenko, Valeri; Wolf, Eckhard (2014): Nuclear invaginations adapt to rabbit early embryonic developement. In: Reproduction, Fertility and Development, Vol. 27, No. 1: p. 139

Popken, Jens; Graf, Alexander; Krebs, Stefan; Blum, Helmut; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Strauss, Axel; Guengoer, Tuna; Zakhartchenko, Valeri; Wolf, Eckhard; Cremer, Thomas (2015): Remodeling of the Nuclear Envelope and Lamina during Bovine Preimplantation Development and Its Functional Implications.
In: PLOS ONE 10(5), e0124619 [PDF, 9MB]

Popken, Jens; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Strauss, Axel; Guengoer, Tuna; Wolf, Eckhard; Zakhartchenko, Valeri (2016): Stage-dependent remodeling of the nuclear envelope and lamina during rabbit early embryonic development. In: Journal of Reproduction and Development, Vol. 62, No. 2: pp. 127-135

Raei, Mehdi; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Mahaki, Behzad (8. May 2018): Bivariate spatiotemporal disease mapping of cancer of the breast and cervix uteri among Iranian women. In: Geospatial Health, Vol. 13, No. 1: pp. 164-171

Raei, Mehdi; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Moayyed, Majid; Mahaki, Behzad (May 2019): Spatio-temporal Pattern of Two Common Cancers Among Iranian Women: An Adaptive Smoothing Model. In: JBUON, Vol. 24, No. 3: pp. 1268-1275 [PDF, 5MB]

Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2010): Kinetic models for cancer imaging. In: Advances in Computatial Biology, Vol. 680: pp. 549-557

Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2011): Voxel based adaptive spatio-temporal modelling of perfusion cardiovascular MRI. In: IEEE Transactions on Medical Imaging, Vol. 30, No. 7: pp. 1305-1313

Schmid, Volker J. ORCID: 0000-0003-2195-8130; Cremer, Marion; Cremer, Thomas (2017): Quantitative analyses of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy. In: Methods, Vol. 123: pp. 33-46 [PDF, 4MB]

Schmid, Volker J. ORCID: 0000-0003-2195-8130; Held, Leonhard (2007): Bayesian Age-Period-Cohort Modeling and Prediction - BAMP. In: Journal of Statistical Software, Vol. 21, No. 8: pp. 1-15 [PDF, 572kB]

Schmid, Volker J. ORCID: 0000-0003-2195-8130; Whitcher, Brandon; Padhani, Anwar; Taylor, N. Jane; Yang, Guang-Zhong (2009): A Bayesian hierarchical model for the analysis of a longitudinal dynamic contrast-enhanced MRI cancer study. In: Magnetic Resonance in Medicine, Vol. 61: pp. 163-174

Schmid, Volker J. ORCID: 0000-0003-2195-8130; Whitcher, Brandon; Yang, Guang-Zhong (2009): Quantitative analysis of dynamic contrast-enhanced mr images based on bayesian p-splines. In: IEEE Transactions on Medical Imaging, Vol. 28: pp. 789-798

Schmidt, Paul; Gaser, Christian; Arsic, Milan; Buch, Dorothea; Förschler, Annette; Berthele, Achim; Hoshi, Muna; Ilg, Rüdiger; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Zimmer, Claus; Hemmer, Bernhard; Mühlau, Mark (2012): An automated tool for detection of FLAIR-hyperintense white-matter lesions in Multiple Sclerosis. In: NeuroImage, Vol. 59, No. 4: pp. 3774-3783

Schmidt, Paul; Mühlau, Mark; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2017): Fitting large-scale structured additive regression models using Krylov subspace methods. In: Computational Statistics and Data Analysis, Vol. 105: pp. 59-75

Schmidt, Paul; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Gaser, Christian; Buch, Dorothea; Bührlen, Susanne; Förschler, Annette; Mühlau, Mark (2013): Fully Bayesian Inference for Structural MRI: Application to Segmentation and Statistical Analysis of T2-Hypointensities.
In: PLOS ONE 8(7), e68196 [PDF, 5MB]

Schneider, Katrin M.; Fuchs, Christiane; Dobay, Akos; Rottach, Andrea; Qin, Weihua; Wolf, Patricia; Álvarez-Castro, J.M.; Nalaskowski, Marcus M.; Kremmer, Elisabeth; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Leonhardt, Heinrich; Schermelleh, Lothar (2013): Dissection of cell cycle-dependent dynamics of Dnmt1 by FRAP and diffusion-coupled modeling. In: Nucleic Acids Research, Vol. 41, No. 9: pp. 4860-4876

Seiler, Doris M.; Rouquette, Jacques; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Strickfaden, Hilmar; Ottmanna, Christian; Drexler, Guido A.; Mazurek, Belinda; Greubel, Christoph; Hable, Volker; Dollinger, Günther; Cremer, Thomas; Friedl, Anna A. (2011): Double-strand break-induced transcriptional silencing is associated with loss of tri-methylation at H3K4. In: Chromosome Research, Vol. 19, No. 7: pp. 883-899

Smeets, Daniel; Markaki, Yolanda; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Kraus, Felix; Tattermusch, Anna; Cerase, Andrea; Sterr, Michael; Fiedler, Susanne; Demmerle, Justin; Popken, Jens; Leonhardt, Heinrich; Brockdorff, Neil; Cremer, Thomas; Schermelleh, Lothar; Cremer, Marion (2014): Three-dimensional super-resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci. In: Epigenetics & Chromatin, Vol. 7, No. 8

Sommer, Julia C.; Gertheiss, Jan; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2014): Spatially regularized estimation for the analysis of DCE-MRI data. In: Statistics in Medicine, Vol. 33, No. 6: pp. 1029-1041

Sommer, Julia C.; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2012): Spatial two tissue compartment model for DCE-MRI. In: ArXiv

Sommer, Julia C.; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2014): Spatial two-tissue compartment model for dynamic contrast-enhanced magnetic resonance imaging. In: Journal of the Royal Statistical Society C - Applied Statistics, Vol. 63, No. 5: pp. 695-713

Staubach, Christoph; Hoffmann, Lothar; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Ziller, Mario; Tackmann, Kirsten; Conraths, Franz J. (2011): Bayesian space-time analysis of Echinococcus multilocularis-infections in foxes. In: Veterinary Parasitology, Vol. 179, No. 1-3: pp. 77-83

Tabelow, Karsten; Clayden, Jonathan; Lafaye de Micheaux, Pierre; Polzehl, Jörg; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Whitcher, Brandon (2011): Image Analysis and Statistical Inference in Neuroimaging with R. In: NeuroImaging, Vol. 55, No. 4: pp. 1686-1693

Trenner, Matthias; Kuehnl, Andreas; Salvermoser, Michael; Reutersberg, Benedikt; Geisbuesch, Sarah; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans Henning (February 2018): Editor's Choice – High Annual Hospital Volume is Associated with Decreased in Hospital Mortality and Complication Rates Following Treatment of Abdominal Aortic Aneurysms: Secondary Data Analysis of the Nationwide German DRG Statistics from 2005 to 2013. In: European Journal of Vascular and Endovascular Surgery, Vol. 55, No. 2: pp. 185-194

Trenner, Matthias; Salvermoser, Michael; Busch, Albert; Eckstein, Hans-Henning; Kühnl, Andreas; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2020): The effects of minimum caseload requirements on management and outcome in abdominal aortic aneurysm repair - A secondary analysis of German DRG statistics data. Mindestmengeneffekte bei der Therapie des abdominalen Aortenaneurysmas Sekundärdatenanalyse der deutschen DRG-Statistik. In: Deutsches Ärzteblatt International, Vol. 117, No. 48: pp. 820-827

Trenner, Matthias; Salvermoser, Michael; Reutersberg, Benedikt; Busch, Albert; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Eckstein, Hans-Henning; Kuehnl, Andreas (29. November 2019): Regional variation in endovascular treatment rate and in-hospital mortality of abdominal aortic aneurysms in Germany. In: VASA : European Journal of Vascular Medicine: pp. 1-8

Whitcher, Brandon; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (27. October 2011): Quantitative Analysis of Dynamic Contrast-Enhanced and Diffusion-Weighted Magnetic Resonance Imaging for Oncology in R. In: Journal of Statistical Software, Vol. 44, No. 5 [PDF, 1MB]

Whitcher, Brandon; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Collins, David J.; Orton, Matthew R.; Koh, Dow-Mu; Diaz de Corcuera, Isabela; Parera, Marta; del Campo, Josep M.; deSouza, Nadita M.; Leach, Martin; Harrington, Kevin; El-Hariry, Iman A. (2011): A Bayesian Hierarchical Model for Dynamic Contrast-Enhanced MRI: A Phase II Study in Advanced Squamous Cell Carcinoma of the Head and Neck. In: Magnetic Resonance Materials in Physics, Biology and Medicine, Vol. 24, No. 2: pp. 85-96

Whitcher, Brandon; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Thornton, Andrew (27. October 2011): Working with the DICOM and NIfTI Data Standards in R. In: Journal of Statistical Software, Vol. 44, No. 6 [PDF, 1MB]

Yazdi, Maryam; Kelishadi, Roya; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Motlagh, Mohammad Esmaeil; Heshmat, Ramin; Mansourian, Marjan (9. December 2020): Geographic risk of general and abdominal obesity and related determinants in Iranian children and adolescents: CASPIAN-IV Study. In: Eastern Mediterranean Health Journal, Vol. 26, No. 12: pp. 1532-1538 [PDF, 201kB]

Paper

Gertheiss, Jan; Kärcher, Julia C.; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2010): Analysis of DCE-MRI Data using a Nonnegative Elastic Net. Department of Statistics: Technical Reports, No.90 [PDF, 2MB]

Horikoshi, Yasunori; Shima, Hiroki; Sun, Jiying; Kobayashi, Wataru; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Ochiai, Hiroshi; Shi, Lin; Fukuto, Atsuhiko; Kinugasa, Yashua; Kurumizaka, Hitoshi; Ikura, Tsuyoshi; Markaki, Yolanda; Tate, Shin-ichi; Igarashi, Kazuhiko; Cremer, Thomas; Tashiro, Satoshi (30. November 2021): Distinctive nuclear zone for RAD51-mediated homologous recombinational DNA repair. bioRxiv, [PDF, 19MB]

Mohajer, Mojgan; Englmeier, Karl-Hans; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (1. December 2010): A comparison of Gap statistic definitions with and without logarithm function. Department of Statistics: Technical Reports, No.96 [PDF, 766kB]

Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2. March 2010): Spatio-Temporal Modelling of Perfusion Cardiovascular MRI. Department of Statistics: Technical Reports, No.77 [PDF, 545kB]

Book Section

Mohajer, Mojgan; Schmid, Volker J. ORCID: 0000-0003-2195-8130; Engels, Nina A.; Noel, Peter B.; Rummeny, Ernst; Englmeier, Karl H. (2012): Stepwise heterogeneity analysis of breast tumors in perfusion DCE-MRI datasets. In: Molthen, Robert C.; Weaver, John B. (eds.) : Medical Imaging 2012: Biomedical Applications in Molecular, Structural and Functional Imaging. Proceedings SPIE, Vol. 8317. 83171K

Conference or Workshop Item

Kärcher, Julia C.; Schmid, Volker J. ORCID: 0000-0003-2195-8130 (2010): Two tissue compartment model in DCE-MRI: A Bayesian approach. 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 14.-17. April 2010, Rotterdam.

Schmid, Volker J. ORCID: 0000-0003-2195-8130; Gatehouse, Peter D.; Yang, Guang-Zhong (2007): Attenuation resilient AIF estimation based on hierarchical Bayesian modelling for first pass myocardial perfusion MRI. UNSPECIFIED, 29. Oktober - 2. November 2007, Australien.

Schmid, Volker J. ORCID: 0000-0003-2195-8130; Yang, Guang-Zhong (2009): Spatio-temporal modelling of first-pass perfusion cardiovascular MRI. World Congress on Medical Physics and Biomedical Engineering 2009, 7.-12. September 2009, München.